Pairwise Alignments

Query, 236 a.a., succinate dehydrogenase iron-sulfur subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., succinate dehydrogenase, iron-sulfur protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  412 bits (1059), Expect = e-120
 Identities = 190/236 (80%), Positives = 215/236 (91%), Gaps = 1/236 (0%)

Query: 1   MKLNFSLYRYNPDVDNKPYMKDYILEVEEGSDMMVLDALILLKEQDPSIAFRRSCREGVC 60
           MKL F++YRYNPDVD KPYM+DY LEV +G+DMMVLDALI LKE+DP++ FRRSCREGVC
Sbjct: 1   MKLEFAVYRYNPDVDTKPYMQDYSLEVADGTDMMVLDALIKLKEKDPTLVFRRSCREGVC 60

Query: 61  GSDGLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLI 120
           GSDGLNMNGKNGLACITP+S  KG K+ IRPLPG+PVVRDL+VD+TQFY  Y K+KPFLI
Sbjct: 61  GSDGLNMNGKNGLACITPVSTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPFLI 120

Query: 121 ADDALPPSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWL 180
            DD   P+RE+LQSPE+RAHLDGLYECIMCACC+T+CPSFWWNPDKFIGP+GLL AYR+L
Sbjct: 121 NDDK-QPAREHLQSPEQRAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFL 179

Query: 181 IDSRDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLINRSV 236
           IDSRDTAT+ERLS LDDA+SVFRCHGIMNCV VCPKGLNPTKAIGHIKSML+ R+V
Sbjct: 180 IDSRDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV 235