Pairwise Alignments

Query, 236 a.a., succinate dehydrogenase iron-sulfur subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., fumarate reductase iron-sulfur protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  108 bits (271), Expect = 7e-29
 Identities = 77/233 (33%), Positives = 120/233 (51%), Gaps = 9/233 (3%)

Query: 2   KLNFSLYRYNPDVDN-KPYMKDYILEVEEGSDMMVLDALILLKE-QDPSIAFRRSCREGV 59
           +L F+++RY+P   N KP M  Y  ++ E   M V  AL  L+E QD S+ F   CR G+
Sbjct: 6   QLTFNIFRYDPQEPNDKPKMVRY--QLTETPGMTVFIALNKLREEQDTSLQFDFVCRAGI 63

Query: 60  CGSDGLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYA-KVKPF 118
           CGS  + +NG   LAC T  +     +I + PLPG  ++ DL V+  +F    A ++K +
Sbjct: 64  CGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERLKLW 123

Query: 119 L--IADDALPPSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAA 176
           L   A+D      E   +PEE A L  L  C+ C  C ++C +     + F+G  G++  
Sbjct: 124 LHPKANDISIHRLEEPMAPEEAARLYELERCVECGVCVSACATKQMR-ETFVGAVGMMKI 182

Query: 177 YRWLIDSRDTATDERLSN-LDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIK 228
            R+ +DSRD  T E   + + +   VF C  ++ C   CPK L   + I +++
Sbjct: 183 ARFELDSRDARTAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLR 235