Pairwise Alignments

Query, 404 a.a., dihydrolipoyllysine-residue succinyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 677 a.a., pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  199 bits (507), Expect = 2e-55
 Identities = 137/439 (31%), Positives = 227/439 (51%), Gaps = 41/439 (9%)

Query: 4   EILVPDLPESVADATVATWHKKPGDMVARDEVIVEIETDKVVLEVPAPDAGVLEAILEQE 63
           EI VPD+ ++ ++  V       GDM++ D+ ++ +ETDK  +EVPAP AG L ++  + 
Sbjct: 240 EIQVPDIGDA-SNVDVIEVLVSVGDMISADQGLITLETDKATMEVPAPFAGKLLSLTVKV 298

Query: 64  GATVLSKQLLARLKPGAVA----GEPTQDTPDATEPSPDKR------------------H 101
           G  V    ++A ++  +VA    G  T     A  P+P  +                  H
Sbjct: 299 GDKVSQGSVIATIETTSVATVSAGAATAPVAQAAAPAPVAQEAAPAPVAAAPSRPPVPHH 358

Query: 102 KASLTEESNDAL--SPAVRRLLAEHNLEANQVKGSGVGGRITREDIEAHLAANKAKPAAK 159
            ++    S  A+  SPAVRRL  E  ++  QV GSG  GRI +ED++A++    ++P A 
Sbjct: 359 PSAGAPVSTGAVHASPAVRRLAREFGVDLTQVTGSGRKGRIMKEDVQAYVKYELSRPKAT 418

Query: 160 AEAPIAA---------LAPVVGRSE----KRVPMTRLRKRIAERLLEAKNNTAMLTTFNE 206
           A   +A           AP V  S+    + +P++R++K     L         +T F+E
Sbjct: 419 AATSVATGNGGGLQVIAAPKVDFSKFGEVEEIPLSRIQKISGPNLHRNWVTIPHVTQFDE 478

Query: 207 VNMKPIMDMRKQYQDVFEKRHG-IRLGFMSFYVKAVTEALKRYPEVNASI--DGDDLVYH 263
            ++  + + RKQ  D   K+    ++  + F +KAV + L+++P  N+S+  DG+ L+  
Sbjct: 479 ADITEMEEFRKQQNDAAAKKKADYKITPLVFMMKAVAKTLQQFPVFNSSLSSDGESLIQK 538

Query: 264 NYFDVSIAVSTPRGLVTPVLKNCDTLSLAQIEKGIKELAEKGRDGKLTVDELTGGNFTIT 323
            YF + +AV TP GLV PV+++ D   + ++ + + +++ + RDGKL   ++ G  FTI+
Sbjct: 539 KYFHIGVAVDTPNGLVVPVVRDVDKKGIIELSRELADISIRARDGKLKSADMQGSCFTIS 598

Query: 324 NGGVFGSLMSTPIINPPQAAILGMHKIQDRAMVVDGKIEILPMMYLALSYDHRSIDGRES 383
           + G  G    TPI+N P  AILG+ K + +      + E   M+ L+LSYDHR IDG  +
Sbjct: 599 SLGGIGGTAFTPIVNYPDVAILGVSKSEIKPKWNGKEFEPKLMLPLSLSYDHRVIDGAMA 658

Query: 384 VGFLVTVKELLEDPARLLL 402
             F VT+  +L D   L+L
Sbjct: 659 ARFSVTLSGILSDIRTLIL 677



 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)

Query: 3   IEILVPDLPESVADATVATWHKKPGDMVARDEVIVEIETDKVVLEVPAPDAGVLEAILEQ 62
           +EI VPD+     D +V       GD +  D  ++ +ETDK  ++VP+P AGV++ +   
Sbjct: 124 VEISVPDIGGDT-DVSVIEVLVAAGDKIEVDAGLITLETDKATMDVPSPFAGVVKEVKVA 182

Query: 63  EGATVLSKQLLARLKPG--AVAGEPTQDTPDATEP 95
            G  V    L+  L+ G  A A  P  + P A+ P
Sbjct: 183 VGDKVSQGSLVIMLEVGGAAPAAAPQANAPAASAP 217



 Score = 46.6 bits (109), Expect = 2e-09
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)

Query: 4  EILVPDLPESVADATVATWHKKPGDMVARDEVIVEIETDKVVLEVPAPDAGVLEAILEQE 63
          E+ VPD+     +  V       GD +A +E I+ +E+DK  +++PAP AGVL  +    
Sbjct: 6  EVFVPDIGGD--EVQVIEICAAVGDTLAAEESILTVESDKATMDIPAPFAGVLAELKVAV 63

Query: 64 GATVLSKQLLARLKPGAVAGEPTQDTPDATEPSP 97
          G  V    L+A ++    + +       A  P+P
Sbjct: 64 GDKVSEGTLIALIQAAGASAQAAAPVAQAAAPAP 97