Pairwise Alignments

Query, 290 a.a., succinate--CoA ligase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., succinyl-CoA synthetase, alpha/beta subunit (sucCD) (Chris Hemme) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  260 bits (665), Expect = 6e-74
 Identities = 127/286 (44%), Positives = 180/286 (62%), Gaps = 1/286 (0%)

Query: 5   INKDTKVICQGFTGGQGTFHSEQAIAYGTQMVGGVSPGKGGTTHLGLPVFNTVREAVEVT 64
           + K  +V+ QG TG     H+   + YGT +V GV+P KGG    G+PV+++V EA    
Sbjct: 424 LGKGARVLVQGITGRSAQLHTRLMLDYGTNIVAGVTPFKGGQVTQGVPVYDSVHEACRQH 483

Query: 65  GATATVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTTDMIDVKVKLEQTGVRMIGPNC 124
              AT+++VPA F  D++LEA+  GI   V ITEGIP  DM+           R+IGPN 
Sbjct: 484 DIDATILFVPAAFAADSLLEAVAEGIPWAVCITEGIPQKDMLRALRVARGARTRIIGPNT 543

Query: 125 PGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGGDPIP 184
           PG+I P  CK+GIMPG++   G + + SRSGTLTYEA  + +  G GQS C G+GGDP  
Sbjct: 544 PGIIVPGACKVGIMPGNVFSPGPLAVFSRSGTLTYEAAARLSAAGIGQSLCAGVGGDPYI 603

Query: 185 GSNFIDILKMFQEDPATEAIVMIGEIGGTAEEEAAAFIKANV-TKPVVSYIAGVTAPPGK 243
           GS+F+ + ++ ++D AT+ ++++GE+GGTAEEE AA+++     KPVVS++AG TAPPG+
Sbjct: 604 GSDFVSLCELVRDDEATQGVLVLGEVGGTAEEELAAWVRETAFPKPVVSFVAGRTAPPGR 663

Query: 244 RMGHAGAIISGGKGTAEEKFAALESAGVKTVKSLADIGKALREVTG 289
           R+GHAGAI+    G    K  AL  AG+     L  +  A+R+  G
Sbjct: 664 RLGHAGAILDEADGGIAGKVRALCDAGIAVCPDLGSLPAAVRQALG 709