Pairwise Alignments

Query, 260 a.a., zinc ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., ABC transporter in pyoverdin gene cluster, permease component from Pseudomonas fluorescens FW300-N2E2

 Score =  122 bits (306), Expect = 9e-33
 Identities = 80/259 (30%), Positives = 141/259 (54%), Gaps = 9/259 (3%)

Query: 8   SLLAGLGIAIIAGPLGSFVVWRRMAYFGDTLAHASLLGLALGFLLD---INLYLALLVCC 64
           +LLAGL I  + G LG+ VV +R A+F + + HA+L G+A+G LL       Y +L   C
Sbjct: 31  ALLAGLLIGPVLGGLGTLVVVKRFAFFSEAVGHAALTGVAIGILLGEPYTGPYGSLFGYC 90

Query: 65  LGMAAILVAMQKQKLIATDTLLGIMAHSALSLGMIAVSFLD---NVRIDLMSYLFGDLLA 121
           L    +L  ++ +  +A DTL+G+    +L+LG   +  L    NV I L + LFG +L 
Sbjct: 91  LLFGILLNYLRNRTGLAPDTLIGVFLSVSLALGASLLLILAGKINVHI-LENVLFGSVLT 149

Query: 122 ISPSDLTFIWFGVVTVSLIVYLLWQPLLSTSVNEELAFVEGTNTDLMRLILMLLIGLVIA 181
           ++ +DL  +      V  +   L+  ++  S N +LA V G     +  + ++L+ L+  
Sbjct: 150 VNGNDLLVLAVVGSLVMALALPLYNRIMLASFNPQLAAVRGVAVKTLDYLFVILVTLITV 209

Query: 182 VGMKFVGALIMGSLLIIPAATARRLSRTPEAMAFWAIGLGVLSVIGGLALSWHFD--TPA 239
             +K +GA+++G+LL+IPAA AR LS++ +   + ++ +   S + G+     FD   P+
Sbjct: 210 AAVKVIGAILVGALLVIPAAAARLLSQSLKGFFWCSVLIATASTLCGILAPIVFDLPIPS 269

Query: 240 GPSVVVSAAVLFVLTQFKR 258
           G ++++ A + F L+   R
Sbjct: 270 GAAIILVAGIAFALSAIAR 288