Pairwise Alignments

Query, 260 a.a., zinc ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., ABC-3 transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  129 bits (323), Expect = 9e-35
 Identities = 80/256 (31%), Positives = 144/256 (56%), Gaps = 9/256 (3%)

Query: 5   LLPSLLAGLGIAIIAGPLGSFVVWRRMAYFGDTLAHASLLGLALGFLLD---INLYLALL 61
           L+ +L+A L    + G LG+ VV +R+A+F + + HA+L G+A+G LL       Y +L 
Sbjct: 28  LVNALIAALIAGPVLGGLGTLVVTKRLAFFSEAVGHAALTGVAIGILLGEPYTGPYASLF 87

Query: 62  VCCLGMAAILVAMQKQKLIATDTLLGIMAHSALSLG---MIAVSFLDNVRIDLMSYLFGD 118
             CL  A ++  ++ +  +AT+TL+G+    +L+LG   ++ +S   NV I L + LFG 
Sbjct: 88  GYCLLFALLVAFLRNRTGLATETLIGVFLSVSLALGASLLLMLSTRVNVHI-LENVLFGS 146

Query: 119 LLAISPSDLTFIWFGVVTVSLIVYLLWQPLLSTSVNEELAFVEGTNTDLMRLILMLLIGL 178
           +L +   DL  +    + VS++   L+  L+    N  LA V G     +  + ++L+ +
Sbjct: 147 VLTVDDRDLGVLLVVGLGVSVVGLPLFNRLMLGGFNPALAQVRGVRVVFLDYLFLMLVTV 206

Query: 179 VIAVGMKFVGALIMGSLLIIPAATARRLSRTPEAMAFWAIGLGVLSVIGGLALSWHFD-- 236
           V    +K +GA+++G+LL+IPAA AR  +R+       +I    LS + G+ +  HFD  
Sbjct: 207 VTVASVKIIGAILVGALLVIPAAAARVAARSLRGFFLLSIVFATLSAVAGILIPVHFDLP 266

Query: 237 TPAGPSVVVSAAVLFV 252
            P+G +++++A +LF+
Sbjct: 267 IPSGGAIILAAGLLFL 282