Pairwise Alignments

Query, 297 a.a., zinc ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., FIG014801: Cation ABC transporter, periplasmic cation-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score = 56.6 bits (135), Expect = 7e-13
 Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 22/263 (8%)

Query: 11  LTVAALFAQSASAIEVLTSIKPIQMITYELMLGTGTPDVLLPSGASPHDYALRPSDVKRI 70
           L  + + A++A  + +  ++ P       ++        L+P+G +PH Y  R  D+KRI
Sbjct: 22  LFTSPVSAETAKRLRIGITLHPYYSYVTNIVGDKAEVVPLIPAGFNPHAYEPRAEDIKRI 81

Query: 71  QQADLVIWFGQDLEPFMSKLLEGRTSALTLSQVPNLALREYGEE----EQHEHDGHHHGH 126
              D+++  G   + F  ++       +  S+ PN+ + E  E               G 
Sbjct: 82  SGLDVIVLNGVGHDDFADRM-------IAASETPNVKVIEANENVPLLAATGTAARGAGK 134

Query: 127 -YDPHFWLGIGPVGQVASAITAKLIELDADQQQQYQDNLVRFLANLAEQDNTIGEKL--K 183
             +PH +L I       + I  +L +LD D  + Y  N   +   L +       KL   
Sbjct: 135 VVNPHTFLSISASIAQVNNIARELGKLDPDNAKAYTQNARAYGKRLRQMRAAALAKLTQA 194

Query: 184 PVTTVPYYVFHDAYGYFEQHFALNNLGHFTVSPERKPGAKTLIAIKKTLNDQL----AKC 239
           P   +     H AY Y  + F L        +   +P    L   KKT+ DQL     K 
Sbjct: 195 PNAELRVATVHAAYDYLLREFGLEVTAVVEPAHGIEPSPSQL---KKTI-DQLRELDVKV 250

Query: 240 VFSEPQFEPAIIETVVRGTSAKI 262
           +FSE  F    ++T+ R +  K+
Sbjct: 251 IFSEMDFPSTYVDTIQRESGVKL 273