Pairwise Alignments

Query, 297 a.a., zinc ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., Zinc ABC transporter, periplasmic-binding protein ZnuA from Pseudomonas fluorescens FW300-N2E2

 Score =  200 bits (509), Expect = 3e-56
 Identities = 114/306 (37%), Positives = 161/306 (52%), Gaps = 16/306 (5%)

Query: 5   LSRYFLLTVA-----ALFAQSASAIEVLTSIKPIQMITYELMLGTGTPDVLLPSGASPHD 59
           +SR+F L VA      L   + + ++VLTSIKP+Q+I   +  G   P+VLLP GASPH 
Sbjct: 1   VSRFFSLFVAFVASFLLIGPAQAEVKVLTSIKPLQLIAAAVQDGVAVPEVLLPPGASPHH 60

Query: 60  YALRPSDVKRIQQADLVIWFGQDLEPFMSKLLEGRT-SALTLSQVPNLALREYGEE---- 114
           YALRPSDV+++Q  DL+ W G D+E F+ ++L GRT  ++ +  +P L LR + ++    
Sbjct: 61  YALRPSDVRKVQSVDLLYWIGPDMEGFLPRVLNGRTLPSVAIQDLPGLKLRHFAQDSASH 120

Query: 115 EQHEHDGHHHGH------YDPHFWLGIGPVGQVASAITAKLIELDADQQQQYQDNLVRFL 168
           E  +HDG  H H       D H WL       +A+ + A L   D     +YQ NL  F 
Sbjct: 121 EDDDHDGDEHDHDHRPGTVDAHLWLSPLNARVIAAKMAADLSAADPANAARYQSNLKGFN 180

Query: 169 ANLAEQDNTIGEKLKPVTTVPYYVFHDAYGYFEQHFALNNLGHFTVSPERKPGAKTLIAI 228
             L   D  +  +L  V   PY+VFH+A+ YFE ++ L + G F V+ E +PGA+ + A+
Sbjct: 181 QRLDALDTRLKARLAGVAGKPYFVFHEAFDYFEDNYGLKHAGVFAVAAEVQPGAQHVAAM 240

Query: 229 KKTLNDQLAKCVFSEPQFEPAIIETVVRGTSAKIGVLDPLGISIELQAGSYFAFLNSLAE 288
           +  L      CVFSEP   P + ET+V G   K+  LD LG         Y   L  L  
Sbjct: 241 RTRLQAVGKTCVFSEPPLRPRLAETLVAGLPVKLAELDALGGYTPATVQGYEQLLEKLGN 300

Query: 289 SYYACL 294
               CL
Sbjct: 301 DLAGCL 306