Pairwise Alignments

Query, 297 a.a., zinc ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 56/257 (21%), Positives = 98/257 (38%), Gaps = 27/257 (10%)

Query: 18  AQSASAIEVLTSIKPIQMITYELMLGTGTPDVLLPSGASPHDYALRPSDVKRIQQADLVI 77
           A++A  ++V+T+   I  +   +         +   GA  H Y   P D+ R + ADLV+
Sbjct: 35  ARAARRLKVVTTFTIIADMARNVAGEAADVVSITKPGAEIHTYQPTPGDLMRARGADLVL 94

Query: 78  WFGQDLEPFMSKLLEGRTSALTLSQVPNLALRE------YGEEEQHEHDGHHHGHYDPHF 131
           W G +LE +  +  E       L  VP + + +       GE       G + G  +PH 
Sbjct: 95  WNGLNLELWFEQFFE------NLGDVPGVVVSQKVVPIGIGE-------GPYEGKPNPHA 141

Query: 132 WLGIGPVGQVASAITAKLIELDADQQQQYQDNLVRFLANLAEQDNTIGEKLKPVTTVP-- 189
           W+           I   L   D      Y+DN   +   + E   T+      +  +P  
Sbjct: 142 WMSPTAALLYVDTIAEALATHDPQNAALYRDNAASYKRRIEE---TVAPLRIALAALPEE 198

Query: 190 ---YYVFHDAYGYFEQHFALNNLGHFTVSPERKPGAKTLIAIKKTLNDQLAKCVFSEPQF 246
                    A+ Y  + F+L  L  + ++ +++   + +  +   +  Q    +FSE   
Sbjct: 199 RRWLVTSEGAFSYLARDFSLRELYLWPINADQQGRPQQVRKVVDAMRAQAIPAIFSESTI 258

Query: 247 EPAIIETVVRGTSAKIG 263
             A  E V R T A+ G
Sbjct: 259 SSAPAEQVARETGARYG 275