Pairwise Alignments

Query, 297 a.a., zinc ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 53/218 (24%), Positives = 83/218 (38%), Gaps = 16/218 (7%)

Query: 50  LLPSGASPHDYALRPSDVKRIQQADLVIWFGQDLEPFMSKLLEGRTSALTLSQVPNLALR 109
           ++P+G +PH Y  RP D++RI   D+++  G   + F  ++       +  S+ P+L L 
Sbjct: 56  IIPAGFNPHAYEPRPEDIRRIGTLDVLVVNGIGHDDFAGRM-------VAASERPDLPLI 108

Query: 110 EYGEE-------EQHEHDGHHHGHYDPHFWLGIGPVGQVASAITAKLIELDADQQQQYQD 162
           E   E         +   G      +PH +L I    Q    I   L E   D+ + +  
Sbjct: 109 EANAEVPLLAASGANARTGAAGKVVNPHTFLSITGSIQQVYTIARALGERVPDRAEVFNA 168

Query: 163 NLVRFLANLAEQDNTIGEKL--KPVTTVPYYVFHDAYGYFEQHFALNNLGHFTVSPERKP 220
           N   +   L         KL   P   +     HDAY Y  + F L        +   +P
Sbjct: 169 NARAYAKRLRGLRAAALAKLAGAPEVGLRVATIHDAYNYLLREFGLEVAAVVEPAHGIEP 228

Query: 221 GAKTLIAIKKTLNDQLAKCVFSEPQFEPAIIETVVRGT 258
               L     TL     + +FSE  F    +ET+ R T
Sbjct: 229 SPAQLAETIATLRRLDVQVIFSELNFPSPYVETIRRET 266