Pairwise Alignments

Query, 297 a.a., zinc ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., adhesion protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.8 bits (125), Expect = 9e-12
 Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 21/186 (11%)

Query: 57  PHDYALRPSDVKRIQQADLVIWFGQDLEPFMSKLLEGRT--------------SALTLSQ 102
           PH    RPS + +++QADLV+  G DLE     +L+ ++              +A  +  
Sbjct: 50  PHQVQARPSLIAKMRQADLVVCAGADLEIGWLPMLQMKSANAKVHSTEQGLFFAAEQIDT 109

Query: 103 VPNLALREYGEEEQHEHDGHHHGHYDPHFWLGIGPVGQVASAITAKLIELDADQQQQYQD 162
           +  LA  +    + H   G+ H H+DP+       V  VA A+TAK+ +L+  +   YQ 
Sbjct: 110 LDKLASVDRSMGDVHA-KGNPHIHFDPN------RVLTVAKALTAKMSQLEPSEAANYQK 162

Query: 163 NLVRFLANLAEQDNTIGEKLKPVTTVPYYVFHDAYGYFEQHFALNNLGHFTVSPERKPGA 222
           +L  F +          E+ KP+       +H ++ Y      +  +      P   P +
Sbjct: 163 SLADFSSRWQAAIPRWEEQAKPLKGKKVIAYHTSFRYLFNWLGIEQVADLEPKPGLAPTS 222

Query: 223 KTLIAI 228
             L ++
Sbjct: 223 GHLASL 228