Pairwise Alignments

Query, 297 a.a., zinc ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., periplasmic component of zinc ABC transporter (Dmitry Rodionov) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 28/293 (9%)

Query: 1   MATMLSRYFLLTVAALFAQSASA-IEVLTSIKPIQMITYELMLGTGTPDVLLPSGASPHD 59
           +A +     L  V  +   +A A +++  SI P +     +        V++P GA PH 
Sbjct: 25  LAVLALALCLTMVTPVIVSAADAPLQISVSIPPQKYFVERIGGDLVRTTVMVPPGADPHT 84

Query: 60  YALRPSDVKRIQQADLVIWFGQDLEP-FMSKLLEGRTSALTL-------SQVPNLAL--- 108
           Y  +PS ++ +  + +    G   E  ++++++     +L++       + +P  A    
Sbjct: 85  YEPKPSQLRGLSGSRIYFSIGAPFEDAWLARIVAAAGPSLSVVPMHKGVTLLPAAAPLHS 144

Query: 109 --REYGEEEQHEHD--------GHHHGHYDPHFWLGIGPVGQVASAITAKLIELDADQQQ 158
              E+ E ++H  D        GH HG  DPH WL    V  ++ AI   L + D     
Sbjct: 145 DEAEHAEGKEHHEDHHAHADGHGHDHGTTDPHVWLSPMLVRHMSLAIRDALAKADPAHAA 204

Query: 159 QYQDNLVRFLANLAEQDNTIGEKLK--PVTTVPYYVFHDAYGYFEQHFALNNLGHFTVSP 216
            Y+ N  RF A++   D    +     P     + VFH ++ YF  ++ L  L   ++  
Sbjct: 205 TYRANYDRFAADIDAMDKKFADLFAALPQDRRRFLVFHPSWNYFAHNYGLTEL---SIEV 261

Query: 217 E-RKPGAKTLIAIKKTLNDQLAKCVFSEPQFEPAIIETVVRGTSAKIGVLDPL 268
           E R+P  + L AI      +    +F +PQF     +T+     A++   DPL
Sbjct: 262 EGREPSPRQLRAIIDLARRERITTIFVQPQFSRRAAQTIATEIGARLVDADPL 314