Pairwise Alignments

Query, 297 a.a., zinc ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., putative zinc ABC transporter, zinc-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 64.3 bits (155), Expect = 3e-15
 Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 15/260 (5%)

Query: 26  VLTSIKPIQMITYELMLGTGTPDVLLPSGASPHDYALRPSDVKRI--QQADLVIWFGQDL 83
           +  +I+P +  T  +     T   ++P G+SP  Y   P  +  +   +A L I +    
Sbjct: 40  ITVTIEPQRYFTEAIAGDKFTVVSMVPKGSSPETYDPIPQQLVSLGDSKAYLRIGYIGFE 99

Query: 84  EPFMSKLLEG--RTSALTLSQVPNLALREYGEEEQ----HEHDGHHHGHYDPHFWLGIGP 137
           + +M +L+           S+  +L L   GE       H+HDGH+H   +PH W     
Sbjct: 100 QTWMDRLMNNTPHIQVFDTSKGIDLILNN-GEHNHAAGHHDHDGHNHA-VEPHIWNSTAN 157

Query: 138 VGQVASAITAKLIELDADQQQQYQDNLVRFLANLAEQDNTIGEKLK-PVTTVPYYVFHDA 196
              +A      L  LD   +  Y          +   D+ I ++L  P +   + ++H A
Sbjct: 158 ALILAGNTFKALCMLDKPNEAYYLARYDSLCQRIQHTDSLIRQQLSAPESAKAFMIYHPA 217

Query: 197 YGYFEQHFALNNLGHFTVSPERKPG-AKTLIAIKKTLNDQLAKCVFSEPQFEPAIIETVV 255
             YF + + LN +       E  P   K LI + K+   +    +F +P+F+    ET+ 
Sbjct: 218 LSYFARDYGLNQISIEEGGKEPSPAHLKELIDLCKS---EKVNVIFVQPEFDKRNAETIA 274

Query: 256 RGTSAKIGVLDPLGISIELQ 275
           + T  K+  ++PL    E +
Sbjct: 275 QQTGTKVVPINPLSYDWETE 294