Pairwise Alignments

Query, 758 a.a., Fe(2+) transporter permease subunit FeoB from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., Small GTP-binding protein protein domain:GTP-binding protein from Pseudomonas syringae pv. syringae B728a

 Score = 54.7 bits (130), Expect = 1e-11
 Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 5   VLTVGNPNSGKTTLFNGLTGAKQQ-VGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALD 63
           +  VG PN GK+T+FN LT  +   VG+ +G+T +++ G     G  + L D  GI    
Sbjct: 5   IALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI---- 60

Query: 64  SGNDSNSIDESIASRAVLT-HPADVIINVVDATCLERSLYMTL--QLRELRRPMIVVLNK 120
              D + +DE +A +++L    ADV++ +VDA     +    +   LR+  +   VV NK
Sbjct: 61  -SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 MD 122
           +D
Sbjct: 120 ID 121



 Score = 37.7 bits (86), Expect = 1e-06
 Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 9/139 (6%)

Query: 4   QVLTVGNPNSGKTTLFNGLTGAKQQ-VGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYAL 62
           ++  +G PN GK+TL N + G  +  V +  G T +     F    ++++L D  G+   
Sbjct: 197 KIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFERNEEKYTLIDTAGV--R 254

Query: 63  DSGNDSNSIDE-SIASRAVLTHPADVIINVVDAT--CLERSLYMTLQLRELRRPMIVVLN 119
             G     +++ S+         A+V+I V+DA    ++  L +     E  R +++ LN
Sbjct: 255 KRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFALEAGRALVIALN 314

Query: 120 KMDAL---KRERVHLDLKQ 135
           K D +   +R+ V ++L++
Sbjct: 315 KWDGMTPGERDFVKIELER 333