Pairwise Alignments

Query, 758 a.a., Fe(2+) transporter permease subunit FeoB from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., GTP-binding protein EngA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 7/123 (5%)

Query: 5   VLTVGNPNSGKTTLFNGLTGAKQQ-VGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALD 63
           V  VG PN GK+TLFN LT  +   V ++ G+T ++K G    +G EF + D  GI   +
Sbjct: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDGTE 64

Query: 64  SGNDSNSIDESIASRAVLTHPADVIINVVDATC--LERSLYMTLQLRELRRPMIVVLNKM 121
            G ++   ++S+A+       ADV++ + DA        L +   LR  ++   VV NK+
Sbjct: 65  EGIETKMAEQSLAA----IEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANKI 120

Query: 122 DAL 124
           D +
Sbjct: 121 DGI 123



 Score = 32.3 bits (72), Expect = 6e-05
 Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 17/144 (11%)

Query: 8   VGNPNSGKTTLFNGLTGAKQ-QVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGN 66
           +G PN GK+TL N + G ++  V +  G T +         G E+ + D  G+       
Sbjct: 204 IGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIPMERDGREYVIIDTAGV------R 257

Query: 67  DSNSIDESIASRAVL-----THPADVIINVVDAT--CLERSLYMTLQLRELRRPMIVVLN 119
             + + E I   +V+        A+V++ ++DA     E+ L +        R +++ +N
Sbjct: 258 RRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQDLGLLGFALNAGRALVIAVN 317

Query: 120 KMDALK---RERVHLDLKQLEAFL 140
           K D +    ++RV  +L +   F+
Sbjct: 318 KWDGIDQGIKDRVKSELDRRLGFI 341