Pairwise Alignments

Query, 758 a.a., Fe(2+) transporter permease subunit FeoB from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., putative phosphoglycerate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 8/126 (6%)

Query: 1   MKYQVLTVGNPNSGKTTLFNGLTGAKQQVGN-WAGVTVEKKTGSFVHAGDEFSLTDLPGI 59
           M   V  VG PN GK+TLFN LT  +Q + N  AG T +++ G     G EFS+ D  G 
Sbjct: 1   MNNLVAIVGRPNVGKSTLFNRLTKTRQAIVNEEAGTTRDRQYGKSEWLGREFSVVDTGGW 60

Query: 60  YALDSGNDSNSIDESIASRAVL-THPADVIINVVDAT--CLERSLYMTLQLRELRRPMIV 116
                 N  +  +E I  + +L    ADVI+ VVD      +  + +   LR    P+I+
Sbjct: 61  VV----NSDDIFEEEIRKQVLLAVEEADVILFVVDVMNGVTDLDMQVATILRRANSPVIM 116

Query: 117 VLNKMD 122
           V NK D
Sbjct: 117 VANKTD 122



 Score = 48.1 bits (113), Expect = 9e-10
 Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 19/168 (11%)

Query: 8   VGNPNSGKTTLFNGLTGAKQQ-VGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGN 66
           VG PN+GK+++ N   G  +  V   AG T +     +   G +F L D  GI   +  N
Sbjct: 181 VGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGFDFYLVDTAGIRKKNKVN 240

Query: 67  DS---NSIDESIASRAVLTHPADVIINVVDAT--CLERSLYMTLQLRELRRPMIVVLNKM 121
           +     S+  SI S       ADV I ++DAT     + L +   +++ ++ ++VV+NK 
Sbjct: 241 EDLEYYSVVRSIRS----IENADVCILMLDATRGVESQDLNILSLIQKNQKGLVVVINKW 296

Query: 122 DALKRERVHLDLKQLEA--------FLGCPVLALSANNKEQVRRFKEK 161
           D ++ +   + +K+ EA        F+  P++  SA  K+++ +  E+
Sbjct: 297 DLIEDKTAKM-MKEFEATIRSRFAPFVDFPIIFASALTKQRILKVLEE 343