Pairwise Alignments

Query, 599 a.a., arginine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., arginyl-tRNA synthetase from Sinorhizobium meliloti 1021

 Score =  126 bits (317), Expect = 2e-33
 Identities = 141/588 (23%), Positives = 243/588 (41%), Gaps = 88/588 (14%)

Query: 56  AQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIFLS----E 111
           A  GD   N  M  AK LG NPR  A  ++D L  +   +   +AGPGFIN+ LS    +
Sbjct: 41  ASHGDVATNAAMVLAKPLGMNPRALADLIVDKLGQDPEVAGVSVAGPGFINVRLSVSYWQ 100

Query: 112 EFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 171
           + LAA   A +   R      A + I  +Y + N    MHVGH R  ++GDA+   L F 
Sbjct: 101 KLLAAITRAGVDYGRSTFG--AGRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFA 158

Query: 172 GHKVIRANHIGDWGTQFGMLIAN-LERVQKASGEVSMELSDLEAFYRESKKLYDEDEQFA 230
           G+ V +  +I D G+Q  +L  +   R ++A GE   +++++ A       L    E  A
Sbjct: 159 GYDVTKEYYINDAGSQIEVLARSAFLRYRQALGE---DIAEIPAGLYPGDYLVPVGEALA 215

Query: 231 ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESMYND---- 286
           +      +++   D +   + ++++D  M   + +   LNV+   +    E   +D    
Sbjct: 216 D-EYGTSLRIMPEDKWVPLVKERVIDAMMAMIREDLAALNVN--HDVFFSERALHDNGAA 272

Query: 287 MLPQIVSDLKAKGLAVE--------------DDGAQVVFLEEFKNKDGEPMGVIIQKRDG 332
            +   ++DL  KG   +              +D  Q +F      + G+ +   + K DG
Sbjct: 273 RIRTAINDLTFKGHVYKGTLPPPKGQLPEDWEDREQTLFR---STEVGDDIDRPLIKSDG 329

Query: 333 GFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVR--KAGYIPENVSLEHH 390
            + Y   D+A  K +++  G   ++Y + +    ++ +   + R    G     V L   
Sbjct: 330 SYTYFAADVAYFKDKFDR-GFHEMIYVLGADHGGYVKRLEALARAISGGTAKLTVLL--- 385

Query: 391 AFGMMLGKDGRPFK--TRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVA 448
              + L ++G P K   R+G  V L D++DE                           V 
Sbjct: 386 CQLVKLYRNGEPVKMSKRSGDFVTLRDVVDE---------------------------VG 418

Query: 449 MAAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVASVFAKA---------- 497
              V++  L +  +    FD+  +    + N   Y+QYA+ R  SVF +A          
Sbjct: 419 RDPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLS 478

Query: 498 GVDMNELTGHIQITEEKEKALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYE 557
            VD     G   I +  E  L+AKL ++   V++ A   +PH +  YL++LA +F   + 
Sbjct: 479 SVDFAAAAG--AIVDPTEMQLVAKLAEYPRVVEAAALSHEPHRIAFYLYDLAAVFHGHWN 536

Query: 558 ------ACPILVAEQESIKQSRLKLAALTAKTIKQGLALLGIDTLERM 599
                     +  +   +  +RL L    A  +K GL++ G    + M
Sbjct: 537 KGKENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584