Pairwise Alignments

Query, 599 a.a., arginine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., arginyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  617 bits (1590), Expect = 0.0
 Identities = 317/583 (54%), Positives = 412/583 (70%), Gaps = 10/583 (1%)

Query: 25  IQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNPR 78
           ++ LI   + Q +E+  A    PA       V ++     GD   N  M   K  G  PR
Sbjct: 1   MKELIQSLLEQTLESLKAQGIVPADFEARIQVDRTKDKSHGDLATNLAMMLTKVAGKPPR 60

Query: 79  EFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPKTIV 138
           E AQ ++D L      +K EIAGPGFIN F+ +  LA Q +AAL DA LGV   AP+T+V
Sbjct: 61  EMAQLIIDNLPASAQVAKVEIAGPGFINFFIDDNALANQLKAALGDAMLGVKAAAPQTVV 120

Query: 139 ADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERV 198
            DYS+PN+AKEMHVGHLRSTIIGD+VVR LEFLGHKVIR NH+GDWGTQFGML+A +E +
Sbjct: 121 VDYSSPNLAKEMHVGHLRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEEL 180

Query: 199 Q-KASGEVSMELSDLEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDV 257
           + +   + ++ELSDLE+FYR +K  +DE ++FA  AR  VV+LQ GD +C ++W++  D+
Sbjct: 181 RAQGDDKANLELSDLESFYRAAKLRFDESDEFATRARQLVVELQSGDAYCNKLWREFNDI 240

Query: 258 TMIQNQRNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKN 317
           ++      Y RL VSLTR++V GES YN  L Q+V+DL AKGL    DGA+VVF EEF+N
Sbjct: 241 SLSHCHDVYARLGVSLTRKDVHGESAYNADLAQVVADLDAKGLLAISDGAKVVFQEEFRN 300

Query: 318 KDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRK 377
           KDGEP+ VIIQK DGGFLY TTD+A  +YR   L ADRVLYF+D RQ  H  Q +++ R 
Sbjct: 301 KDGEPLPVIIQKADGGFLYATTDLAAMRYRSGVLNADRVLYFVDLRQALHFQQVFSLART 360

Query: 378 AGYIPENVSLEHHAFGMMLGKDGRPFKTRAGGTVRLADLLDEAQERAKALIESKNPELSA 437
           AG++ +N++LEH  FG M G+DGRPFKTR+GG V+L DLLDEA ERA+ L+ SKNP++  
Sbjct: 361 AGFVRDNMTLEHMGFGTMNGEDGRPFKTRSGGVVKLVDLLDEAVERAEQLVRSKNPDMDE 420

Query: 438 EEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKA 497
            E   IA  V +A+VKYADLSK+R++DY+F ++ ML+FEGNTAPY+ YAYTRVA +F KA
Sbjct: 421 TEVKEIARVVGIASVKYADLSKNRSSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKKA 480

Query: 498 -GVDMNELTGHIQITEEKEKALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFY 556
             +D+      + +  +KEK L  KL QF E +  +  +GQPHI+C YL+ELAG FSSFY
Sbjct: 481 ENIDLT--NAELVLDHDKEKELGNKLAQFGEILARMVDKGQPHILCGYLYELAGAFSSFY 538

Query: 557 EACPILVAEQESIKQSRLKLAALTAKTIKQGLALLGIDTLERM 599
           EACP+L A+ E+ + SRL L+ LTA T+KQGL+LLGI+TLERM
Sbjct: 539 EACPVLSADSETARDSRLLLSRLTADTLKQGLSLLGIETLERM 581