Pairwise Alignments

Query, 599 a.a., arginine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., Arginine--tRNA ligase (NCBI) from Rhodospirillum rubrum S1H

 Score = 80.5 bits (197), Expect = 2e-19
 Identities = 141/612 (23%), Positives = 240/612 (39%), Gaps = 117/612 (19%)

Query: 50  VRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVL-NLEGIASKTEIAGPGFINIF 108
           V    +A  GD   N  M  AK  G  PR  A+ +++ L  ++GI +  E AGPGFIN+ 
Sbjct: 35  VEPPREAAHGDMATNAAMVLAKPAGLAPRAVAEMLVEKLVGVDGIVA-AETAGPGFINLR 93

Query: 109 LSEEFLAAQAEAALADARLGVAQEAPK-----TIVADYSAPNVAKEMHVGHLRSTIIGDA 163
           L  +      +  L    LG A  A        +  ++ + N    MHVGH R  + GDA
Sbjct: 94  LDPKIWRKTLKTVLT---LGTAFGASTMGRGAAVNVEFVSANPTGPMHVGHGRGAVFGDA 150

Query: 164 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAF--YRESKK 221
           +   L   G  V R  ++ D G Q    + +L R   A   V++   D  AF     +++
Sbjct: 151 LAALLVKAGWAVTREYYVNDAGAQ----VDSLARALYARYRVAVGDLDEAAFAAMLAARE 206

Query: 222 LYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQR--NYDRLNVSLTRENVM 279
           +    +     A + + +  G        W  + +   +   R    +R+ ++L +E++ 
Sbjct: 207 IEYGGDYLVPVAAD-IAQADG------TRWTTVAESDWLPAFRAIGIERM-LALIKEDLA 258

Query: 280 GESMYNDM------------LPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKD-------- 319
              + +D+            + ++++DL+++ L        V  LE  K K         
Sbjct: 259 ALGVVHDVFTSEQALVRAGRVDEMMTDLESRDL------VYVGTLEPPKGKTPDDWEPRP 312

Query: 320 ---------GEPMGVIIQKRDGGFLYTTTDIAC--AKYRYETLGADRVLYFIDSRQHQHL 368
                    G+ +   ++K DG + Y  +DIA    K++   LG   VL   D   +   
Sbjct: 313 QTLFRATGFGDEVDRPLKKSDGSWTYFASDIAYHHDKFKRGFLGMINVL-GADHGGYVKR 371

Query: 369 MQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDEAQERAKA 426
           ++A       G    +V L      + L  +G P K   RAG  + L +++DE       
Sbjct: 372 LKAAVKAVSNGEAELDVKLVQL---VKLLDNGEPVKMSKRAGTFITLREVVDE------- 421

Query: 427 LIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFE---GNTAPYM 483
                               V    V++  L+  R  D   D+D     E    N   Y+
Sbjct: 422 --------------------VGKDVVRFIMLT--RKNDAALDFDYARVTEKTRDNPVFYV 459

Query: 484 QYAYTRVASVFAKA-----GVDMN----ELTGHIQITE-EKEKALIAKLLQFEEAVQSVA 533
           QYA+ R  SV   A     G D++      T  + + + ++E A++  L  +   V+S A
Sbjct: 460 QYAHARACSVARHAAQTFPGRDLSAAALAATADLDLLDADEEMAMVRLLAGWPRLVESAA 519

Query: 534 REGQPHIMCSYLFELAGIFSSFYE------ACPILVAEQESIKQSRLKLAALTAKTIKQG 587
              +PH +  YL E+A  F   +           L+   E+   +RL L    A  I  G
Sbjct: 520 EAHEPHRVAFYLGEVAAAFHGLWNRGNDNAELRFLLPTDEARSLARLALVQAVASVIASG 579

Query: 588 LALLGIDTLERM 599
           L + G++ ++ M
Sbjct: 580 LEIFGVEPVKEM 591