Pairwise Alignments

Query, 599 a.a., arginine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., arginyl-tRNA synthetase ArgS from Phaeobacter inhibens DSM 17395

 Score =  118 bits (296), Expect = 6e-31
 Identities = 145/617 (23%), Positives = 252/617 (40%), Gaps = 83/617 (13%)

Query: 24  NIQALINDRVSQAIEAAGAPAGTP---ALVRQSAKAQFGDYQANGIMGAAKQLGTNPREF 80
           +I++L+ D ++  ++    P G       V     A  GD   N  M  AK     PR+ 
Sbjct: 6   DIRSLVLDCLTAMVDEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKMKPRDI 65

Query: 81  AQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALA-DARLGVAQ-EAPKTIV 138
           A  +   L  +   +  E+AGPGF+N+ L      +   A LA D + G +   A K + 
Sbjct: 66  ADALAGKLAADARVTSAEVAGPGFLNLRLDRSSWQSVLGAVLAEDIKFGRSDLGAGKRVN 125

Query: 139 ADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLE-R 197
            +Y + N    +HVGH R  + GDA+   L+F+G+ V R  +I D G Q  +L  ++  R
Sbjct: 126 VEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGYDVTREYYINDGGGQVDVLARSVYLR 185

Query: 198 VQKASGEVSMELSDLEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDV 257
             +A G+   E++ ++  Y     L    +   +   +  V  Q  D +  E+     D 
Sbjct: 186 YLEAHGQ---EVAFVDGTY-PGDYLVPVGQALKDKVGDAYVN-QPEDVWLEEIRNFATDA 240

Query: 258 TMIQNQRNYDRLNVSLTRENVMGESMY-NDMLPQIVSDLKAKGLAVE------------- 303
            M   + +   L + + +     +S+Y   ++   +  L  KGL  E             
Sbjct: 241 MMDLIRADLASLGIQMDK-FFSEKSLYGTGLIESALKSLDDKGLIYEGVLEPPKGKKPDD 299

Query: 304 -DDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETL--GADRV--LY 358
            +   Q +F      + G+ +   ++K DG + Y   DIA   Y Y+ +  G D +  ++
Sbjct: 300 WEPREQTLFK---STEHGDDVDRPVKKSDGAWTYFAPDIA---YHYDKVERGFDMLIDIF 353

Query: 359 FIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 416
             D   +   M+A       G +P ++ L      + L KDG+ FK   RAG  V L D+
Sbjct: 354 GADHGGYVKRMKAAVSALSDGRVPLDIKL---CQLVKLFKDGQEFKMSKRAGTFVTLRDV 410

Query: 417 LDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AF 475
           +D                            V     ++  L++     + FD D  L   
Sbjct: 411 VD---------------------------AVGPDVTRFMLLTRKNDQGFDFDLDKALEQS 443

Query: 476 EGNTAPYMQYAYTRVASVF---AKAGVDMNELT---GHIQITEEKEKALIA-KLLQFEEA 528
           + N   Y+QYA  R+ S     A+AG+  ++ T     + + ++  +  +A KL ++   
Sbjct: 444 KDNPVFYVQYANARICSTLRKAAEAGITTDDATLAAADLTLLQDDAQLTVAKKLAEWPRL 503

Query: 529 VQSVAREGQPHIMCSYLFELAGIFSSFY------EACPILVAEQESIKQSRLKLAALTAK 582
           V+  AR  +PH +  YL++LA      Y      E    +     S   +++ LA   + 
Sbjct: 504 VEIAARTNEPHRVAFYLYDLASELHGLYHLGKTNEGLRFVNESNPSATHAKMALAKAVSI 563

Query: 583 TIKQGLALLGIDTLERM 599
            I  GL +LG+   + M
Sbjct: 564 VISAGLGILGVTPAQEM 580