Pairwise Alignments

Query, 599 a.a., arginine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., arginyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  609 bits (1570), Expect = e-178
 Identities = 315/580 (54%), Positives = 405/580 (69%), Gaps = 6/580 (1%)

Query: 24  NIQALINDRVSQAIEAAGAPAGTPALVR--QSAKAQFGDYQANGIMGAAKQLGTNPREFA 81
           +IQ+L+   +    + A  PA   A ++  ++     GD+  N  M   K    NPRE A
Sbjct: 4   HIQSLLEQAIQTLKQQAIIPADFEARIQVDRTKDKTHGDFATNLAMMLTKVARKNPREVA 63

Query: 82  QKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADY 141
           Q ++D L      +K EIAGPGFIN F+ E  L  Q  AAL+D  LGV    P+T+V DY
Sbjct: 64  QLIIDSLPQNSQVAKVEIAGPGFINFFIDENALTNQLMAALSDDHLGVTLPTPQTVVVDY 123

Query: 142 SAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKA 201
           S+PN+AKEMHVGHLRSTIIGDAVVR LEF GHKVIR NH+GDWGTQFGML+A +E ++  
Sbjct: 124 SSPNLAKEMHVGHLRSTIIGDAVVRALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAQ 183

Query: 202 SGE-VSMELSDLEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMI 260
            GE   +EL+DLE+FYR +K  +DE E+FA  AR  VV+LQ GD +C ++W++  D+++ 
Sbjct: 184 QGEQAQVELADLESFYRAAKVRFDESEEFATRARQLVVELQSGDEYCNKLWREFNDISLS 243

Query: 261 QNQRNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDG 320
                Y+RL VSLTR +V GES YND L Q+V DL A+GL  E +GA+VVF +EF+ K+G
Sbjct: 244 HCHEVYERLGVSLTRADVRGESAYNDDLEQVVRDLDAQGLLSESNGAKVVFQDEFQTKEG 303

Query: 321 EPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGY 380
           EP+ VIIQK DGGFLY T+D+A  +YR   L ADR LYF+D RQ  H  Q +++ R A +
Sbjct: 304 EPLPVIIQKADGGFLYATSDLAAMRYRSNVLKADRALYFVDLRQALHFQQVFSLARTANF 363

Query: 381 IPENVSLEHHAFGMMLGKDGRPFKTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEK 440
           +   +SLEH  FG M G+DGRPFKTR+GG V+L DLL EA+ RA  L+ SKNP++  EE 
Sbjct: 364 VRPELSLEHMGFGTMNGEDGRPFKTRSGGVVKLVDLLSEAETRALELVRSKNPDMDEEEL 423

Query: 441 ANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVD 500
           A IA  V +A+VKYADLSK+R +DY+F ++ ML+FEGNTAPY+ YAYTRVA +F +A   
Sbjct: 424 AKIAKVVGIASVKYADLSKNRASDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRAA-- 481

Query: 501 MNELTG-HIQITEEKEKALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEAC 559
             +LTG  I++  +KEK L  KL QF E +  +  +GQPH +C YLFELAG FSSFYEAC
Sbjct: 482 EIDLTGASIKLEHDKEKELGNKLAQFAEVLGRMVAKGQPHALCGYLFELAGAFSSFYEAC 541

Query: 560 PILVAEQESIKQSRLKLAALTAKTIKQGLALLGIDTLERM 599
           P+L A+ E  K+SRL LA LTAKT+KQGL LLGI+TLERM
Sbjct: 542 PVLAADSEDEKKSRLLLAQLTAKTLKQGLDLLGIETLERM 581