Pairwise Alignments

Query, 599 a.a., arginine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., arginyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  124 bits (311), Expect = 1e-32
 Identities = 144/562 (25%), Positives = 227/562 (40%), Gaps = 66/562 (11%)

Query: 58  FGDYQANGIMGAAKQLGTNPREFAQKVLDVL-NLEGIASKTEIAGPGFINIFLSEEF--- 113
           FGD  AN  +  +K  G  PRE A ++   L + +   +  +IAGPGF+N+  S +F   
Sbjct: 36  FGDLAANIALVISKDAGVPPRELASRLAGALRDSDPAIASVDIAGPGFLNVTYSPDFWRE 95

Query: 114 LAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 173
                EAA  D     A  A +    +Y + N    +H+GH R   +GD + R L F G+
Sbjct: 96  TVLHVEAA-GDRYGATAVGAGRKAQVEYVSANPTGPLHIGHGRGAALGDCLARVLRFAGY 154

Query: 174 KVIRANHIGDWGTQFGML-IANLERVQKASGEVSMELSDLEAFYRESKKLYDEDEQFAET 232
            V    +I D G Q  +L ++   R  + SG      +  E FYR         E  A+ 
Sbjct: 155 DVTTEYYINDAGRQMRLLGLSVWLRALELSGR---PFTLPEDFYRGDYIKDIAAEMLAKD 211

Query: 233 ARNYVVKLQGGDPFCLEMWKKLV------DVTMIQNQRNYDRLNVSLTRENVMGESMYND 286
                +    G   C E     +      D+   + +       +SL RE  + ++    
Sbjct: 212 PGLVDLPEAEGQDRCFEYAMNSIMDGIKQDLADFRVEHQVWFSELSLVREGAVEKTFER- 270

Query: 287 MLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKY 346
                   LKA GLA E DGA    L       G+    +++K DG   Y  +DIA    
Sbjct: 271 --------LKAAGLAFEQDGA----LWFRTTTLGDDKDRVLRKSDGTLTYFASDIAYHDN 318

Query: 347 RYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKTR 406
           +Y+  G D V+    +  H ++ +    V   G  PE        F ++L          
Sbjct: 319 KYDR-GFDLVVDIWGADHHGYVPRMRAAVAALGKRPEQ-------FDVIL---------- 360

Query: 407 AGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYV 466
               V+L +LL   ++ A +    +   L      ++   V   A ++  LS  R +D  
Sbjct: 361 ----VQLVNLLQNGEQIAMSTRAGQFETLH-----DVVREVGADAARFMFLS--RKSDSH 409

Query: 467 FDWDNMLAFE---GNTAPYMQYAYTRVASVFAKAGVDMNELTGHIQ------ITEEKEKA 517
            D+D  L  +    N   Y+QYA+ RV +V  KA      L   +       +T  +E  
Sbjct: 410 LDFDLELVKQRSMDNPVYYVQYAHARVCAVLRKAAERAIVLPARLDAAALAPLTLPEELD 469

Query: 518 LIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQESIKQSRLKLA 577
           L+  + +  + + + A    PH +  YL E+AG   S+Y   P+L A       +RL L 
Sbjct: 470 LLRLVDRMPDTLSAAAEGLAPHHVSFYLMEVAGALHSYYAKVPVLNAADAETIVARLALL 529

Query: 578 ALTAKTIKQGLALLGIDTLERM 599
               + +  GL LLG++  E M
Sbjct: 530 RAVGQAVANGLNLLGVEAPEAM 551