Pairwise Alignments

Query, 599 a.a., arginine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., arginine--tRNA ligase from Methanococcus maripaludis S2

 Score =  156 bits (395), Expect = 2e-42
 Identities = 131/552 (23%), Positives = 251/552 (45%), Gaps = 32/552 (5%)

Query: 59  GDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQA 118
           GDY  N     AK L   P+  A+ + + L++ GI     + G  +IN F++    + + 
Sbjct: 36  GDYSTNISFRLAKDLKKAPKMIAEDIANSLSILGIERIEAVNG--YINFFMNYSDFSKET 93

Query: 119 EAALADAR--LGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVI 176
            + ++D +   G  ++  + ++ ++++ N     H+GH R+ +IGD++ R L   G+ V 
Sbjct: 94  VSKISDEKENFGKLEKRNEKVILEHTSANPNGPFHIGHGRNMVIGDSLKRILIASGYDVE 153

Query: 177 RANHIGDWGTQFGMLIA--------NLERVQKASGEVSMELSDLEAFYRESKKLYDEDEQ 228
              ++ D G Q  +++         N ++   A GEV +E + L A   E+++L   +++
Sbjct: 154 TQYYVNDMGRQEAIVVFGNEKFELDNSKKADHAIGEVYVETNKLLA---ENEEL---EQE 207

Query: 229 FAETARNYVVKLQGG-DPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESMYNDM 287
                +NY    + G +    E +K  V+ ++   +     LN+   +     E + + M
Sbjct: 208 ILNLMKNYESACEAGIENELTEKFKNAVNYSLGGFKETLLTLNIYHDKFVWESEFVKSGM 267

Query: 288 LPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYR 347
           + ++++ L   G  VED+  ++   +      G    +++ + +G  LY+T DIA     
Sbjct: 268 VREVINRLMNTGKVVEDEVYRLDLSDY-----GIEKKLVLARLNGTSLYSTRDIA----- 317

Query: 348 YETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKTRA 407
           Y     +   + ++     H + A  + +    +  N +     F   +        TR 
Sbjct: 318 YHITKMENCDFAVNLLGADHKLTAVMVNKTLALLGYNEA--EVVFYEFISLPEGSMSTRK 375

Query: 408 GGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVF 467
           G  + + +L +EA+ RA   +  +    S EE   IA  +A+ AV+Y  +        VF
Sbjct: 376 GRFISMDELFEEAKSRAAEEVRKRGVAQSEEEIEEIAKKIAVGAVRYNIVRIAPEKPMVF 435

Query: 468 DWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNELTGHIQITEEKEKALIAKLLQFEE 527
            WD  L FE    P +QYA+ R + +        NE      + E  EK ++  L +  +
Sbjct: 436 RWDEALDFEKVGCPVIQYAHARCSRILENVENISNENLFAYDMNEN-EKTIVKLLSKLPK 494

Query: 528 AVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQESIKQSRLKLAALTAKTIKQG 587
            V+  A   +P I+ +Y+ ++A  F+ FY  CP+L  E E++K SRL + + T   ++  
Sbjct: 495 IVEKAAEVRKPQIVANYVLDVAQGFNKFYANCPVLKEENETVKNSRLAIVSTTKTVLENT 554

Query: 588 LALLGIDTLERM 599
           L LLGI+   +M
Sbjct: 555 LDLLGIEMPGKM 566