Pairwise Alignments

Query, 599 a.a., arginine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., arginyl-tRNA synthetase from Marinobacter adhaerens HP15

 Score =  136 bits (343), Expect = 2e-36
 Identities = 153/607 (25%), Positives = 254/607 (41%), Gaps = 86/607 (14%)

Query: 29  INDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQ 82
           ++D +  A+ A  A    PA       V  +     GDY  N  + A+K  G  PR+ A+
Sbjct: 5   VSDLLQSALAALQADGTLPADQSFTPQVGNTKDKSHGDYACNIALVASKAAGCAPRKLAE 64

Query: 83  KVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADA-RLGVAQEAP-KTIVAD 140
            +++ L       K EIAGPGFIN F+S           L +  R G   +   + +  +
Sbjct: 65  ALVENLPESSAVEKVEIAGPGFINFFMSTASAFEVVNTILDEGDRFGRNNQGQGEKVQVE 124

Query: 141 YSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQK 200
           + + N    +HVGH R   IGD + R LE  G+ V R  +  D G Q   L  +++   K
Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDCLCRLLEANGYDVTREFYYNDAGAQIDNLALSVQSRVK 184

Query: 201 ----------ASGEVSMELSDLEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPFCLEM 250
                     A G     + D+   Y     +  +D +    A          DP   + 
Sbjct: 185 GLTPDDESWPADGYRGDYIVDVAKAYLAGDTVTADDREVTAKA----------DPEDRDA 234

Query: 251 WKKLVDVTMIQNQRNYDRLNVSLTRENVMGES-MYND-MLPQIVSDLKAKGLAVEDDGAQ 308
            ++   V  ++ +++ D     +  +    ES +Y D  +   V  L+  G   E DGA 
Sbjct: 235 IREFA-VAYLRREQDLDLKAFGVQFDVYFLESSLYEDGKVEATVKRLQENGYTYEQDGAM 293

Query: 309 VVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHL 368
            +   EF    G+    +++K+DGG+ Y   D+A    +++  G   V+    +  H   
Sbjct: 294 WLKTTEF----GDDKDRVMRKKDGGYTYFLPDVAYHLDKWQR-GFTTVINEQGADHHS-- 346

Query: 369 MQAWTIVR-KAGYIPENVSLEH-------HAFGMMLGKDGRPFKT--RAGGTVRLADLLD 418
               T+ R +AG    N  +         H   +M+ + G+  K   RAG  V + DL+D
Sbjct: 347 ----TVTRVRAGLQALNAGIPQGWPDYVLHQM-VMVTRSGQEVKISKRAGSYVTVRDLID 401

Query: 419 EAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGN 478
           E    A     +             A  V        DL++ +T +             N
Sbjct: 402 EVGRDATRFFLA-------------ARRVDSQLTFDIDLARSQTNE-------------N 435

Query: 479 TAPYMQYAYTRVASVF---AKAGVDM--NELTGHIQI-TEEKEKALIAKLLQFEEAVQSV 532
              Y+QYA+ R+ SV    A+ GV+   NE  G + + T ++EK L  +L ++ E + + 
Sbjct: 436 PVYYVQYAHARICSVLRKLAEEGVERSRNECIGDLSLLTLDEEKDLANQLAKYPELIANS 495

Query: 533 AREGQPHIMCSYLFELAGIFSSFYEACPILVAEQESIKQSRLKLAALTAKTIKQGLALLG 592
           A + +PH +  YL +LAG F ++Y A  +L+ E  +++ +R+ L     + I  GL LLG
Sbjct: 496 AAQREPHHLTHYLRDLAGQFHTYYNAHKVLI-EDTAVRDARVSLYLAIRQVIANGLDLLG 554

Query: 593 IDTLERM 599
           +   E M
Sbjct: 555 VSAPEEM 561