Pairwise Alignments

Query, 599 a.a., arginine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., arginyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  147 bits (372), Expect = 9e-40
 Identities = 154/566 (27%), Positives = 243/566 (42%), Gaps = 74/566 (13%)

Query: 58  FGDYQANGIMGAAKQLGTNPREFAQKVLDVL-NLEGIASKTEIAGPGFINIFLSEEFL-- 114
           FGD  AN  +  AKQ G NPRE A ++ D L N +   +  +IAGPGF+N+  S++F   
Sbjct: 36  FGDLAANIALVLAKQAGQNPRELATRIADALRNRDADITAIDIAGPGFLNVTYSQDFWRE 95

Query: 115 ----AAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEF 170
               A +A +A   +  G    A + +  +Y + N    +H+GH R   +GD++ R + F
Sbjct: 96  TILRAQEAGSAFGSSDTG----AGRKVQVEYVSANPTGPLHIGHGRGAAVGDSLARIMRF 151

Query: 171 LGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYDEDEQFA 230
            G+ V    +I D G Q  +L   L    +A       ++  E FYR         +   
Sbjct: 152 AGYDVSTEYYINDAGRQMRLL--GLSVWVRAKELAGRPVTLPEDFYR--------GDYIK 201

Query: 231 ETARNYVVKLQG--------GDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGES 282
           + AR  + K  G        G+  C       +   + Q+  ++   +     E  + E 
Sbjct: 202 DIARELMEKEPGLLDLDDAAGEDRCFAYAMSSILDGIKQDLADFRVEHQVWFSERSLVEG 261

Query: 283 MYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIA 342
                + +  + LK  GLA E DGA      +F    G+    +++K DG   Y ++DIA
Sbjct: 262 ---GAVEKTFNRLKEAGLAFEQDGALWFRTTDF----GDDKDRVLRKSDGTLTYFSSDIA 314

Query: 343 CAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRP 402
               +Y+  G D V+    +  H ++ +    V   G  PE       AF ++L      
Sbjct: 315 YHDNKYDR-GFDLVVDIWGADHHGYIPRMRAAVAALGRKPE-------AFDVVL------ 360

Query: 403 FKTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRT 462
                   ++L +LL     R   L+         E  A++       A ++  LS  R 
Sbjct: 361 --------IQLVNLL-----RGGELVAMSTRAGQFETLADVVKETGADAARFMFLS--RK 405

Query: 463 TDYVFDWDNMLAFE---GNTAPYMQYAYTRVASVFAKA---GVDMN-ELTGH--IQITEE 513
           +D   D+D  L  +    N   Y+QYA+ RV SV  KA   G++M  +L G     ++ +
Sbjct: 406 SDSPLDFDLELVKQRTMDNPVYYVQYAHARVCSVLRKAAERGIEMPAQLDGASLAPLSGD 465

Query: 514 KEKALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQESIKQSR 573
            E  L+  L +FEE V   A    PH +  YL E+AG   S+Y   PIL A ++ +   R
Sbjct: 466 DEMELLRLLDRFEETVAGAATALAPHHISHYLMEVAGALHSYYARQPILNATEQDVIVPR 525

Query: 574 LKLAALTAKTIKQGLALLGIDTLERM 599
           L L       +  GL+LLG+   E M
Sbjct: 526 LALLRAVGCVLANGLSLLGVSAPESM 551