Pairwise Alignments

Query, 599 a.a., arginine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., arginyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score =  604 bits (1558), Expect = e-177
 Identities = 308/579 (53%), Positives = 403/579 (69%), Gaps = 4/579 (0%)

Query: 24  NIQALINDRVSQAIEAAGAPAGTPALVR--QSAKAQFGDYQANGIMGAAKQLGTNPREFA 81
           +IQ+L+   +    +    PA   A ++  ++     GD   N  M   K  G NPRE A
Sbjct: 4   HIQSLLEQTIESFKQQGILPADFEARIQVDRTKDKSHGDLATNLAMMLTKAAGKNPRELA 63

Query: 82  QKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADY 141
           Q ++D L      +K EIAGPGFIN F+ +  LA Q +AA++D  LG+    P+TIV DY
Sbjct: 64  QLIIDNLPASNYVAKVEIAGPGFINFFIDDSALANQLQAAISDEHLGIKLPTPQTIVVDY 123

Query: 142 SAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKA 201
           S+PN+AKEMHVGHLRSTIIGD+VVRTLEFLGHKVIR NH+GDWGTQFGML+A +E ++  
Sbjct: 124 SSPNLAKEMHVGHLRSTIIGDSVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQ 183

Query: 202 SGE-VSMELSDLEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMI 260
           +GE   +ELSDLE FYR +K  +DE  +FA  AR  VV+LQ GD +C ++W++  D+++ 
Sbjct: 184 NGEQAQLELSDLETFYRAAKLRFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLS 243

Query: 261 QNQRNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDG 320
                Y+RL VSLTR +V GES YN  L Q+V DL A+GL  + +GA+VVF EEF+NK+G
Sbjct: 244 HCHEVYERLGVSLTRADVHGESAYNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEG 303

Query: 321 EPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGY 380
           E + VIIQK DGG+LY TTD+A  +YR   L ADRVLYF+D RQ  H  Q +++ + A +
Sbjct: 304 EALPVIIQKADGGYLYATTDLAAMRYRSSVLKADRVLYFVDLRQALHFQQVFSLAKLAKF 363

Query: 381 IPENVSLEHHAFGMMLGKDGRPFKTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEK 440
           +  ++SLEH  FG M G+DGRPFKTR GG V+L DLLDEA  RA  L+ SKNP++     
Sbjct: 364 VRNDMSLEHLGFGTMNGEDGRPFKTRTGGVVKLVDLLDEANTRALELVRSKNPDMDEATL 423

Query: 441 ANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVD 500
           A IA  V ++AVKYADLSK+RT+DY+F ++ ML+FEGNTAPY+ YAYTRVA +F +A  D
Sbjct: 424 AEIARVVGISAVKYADLSKNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA-TD 482

Query: 501 MNELTGHIQITEEKEKALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACP 560
           ++     I +  EKEK L  KL QF E +  V  +GQPH++C YL+ELAG FSSFYEACP
Sbjct: 483 IDLSQAKIVLEHEKEKDLGNKLAQFGEILSRVVDKGQPHVLCGYLYELAGAFSSFYEACP 542

Query: 561 ILVAEQESIKQSRLKLAALTAKTIKQGLALLGIDTLERM 599
           +L A+ +  K SRL L+ LTA T+++GL LLGI+TLERM
Sbjct: 543 VLAADNDEQKHSRLLLSQLTANTLQKGLNLLGIETLERM 581