Pairwise Alignments

Query, 939 a.a., peptidase M16 from Vibrio cholerae E7946 ATCC 55056

Subject, 949 a.a., peptidase, M16 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 87.8 bits (216), Expect = 3e-21
 Identities = 138/650 (21%), Positives = 256/650 (39%), Gaps = 59/650 (9%)

Query: 27  YRYITLSNGLRTLLIQSPDVQKCAAALAVNVGHFDDPIERQGLAHYLEHMLFLGTEKYPK 86
           Y+   L+NGL  +L Q          +  +VG   +   R G AH  EHM+F G+E    
Sbjct: 52  YKKYQLANGLTVILHQDRSDPLVHVDVTYHVGSARELAGRSGFAHLFEHMMFQGSE---H 108

Query: 87  VGDFQTF--ISQHGGSNNAWTGTEHTCFFFDVLPNAFAKAL----DRFSQFFIAPLFNAE 140
           V D Q F  +++ GG+ N  T T+ T +F  V  N   K L    DR    F+ P   +E
Sbjct: 109 VADEQHFEVVTEAGGTLNGSTNTDRTNYFETVPNNQLEKMLWLESDRMG--FLLPALTSE 166

Query: 141 ALDKERQAVDSEYKLKIKDE--SRRLYQVQKETINPQHPFSKFSVGNQHTLGDRENSSIR 198
             + +R+ V +E   +I ++   R   +  +      HP+S   +G    L    N +  
Sbjct: 167 KFEVQRETVKNERAQRIDNQPYGRMSERFNQAMFPVGHPYSWPVIGWPEDL----NRATV 222

Query: 199 DEIIEFYQSHYSAKLMTLSLIGSQSFDELE--AWAERYFAAIPNPQRDIKPLPPFVDREH 256
           D++  F+Q  Y     TL++ G   FDEL+  AW  +YF  IP    +++P P  +    
Sbjct: 223 DDVKHFFQRWYGPNNATLTIGG--DFDELQALAWVNKYFGEIPRGP-EVQPEPKTLVTID 279

Query: 257 TGILIQIEPLKEIRKLILAFPMPSTESYYQKKPLSYFAHLIGYEGEGSLLEALKEKGWIT 316
               + +E    +  + + FP     ++  +  L   A+++G      + + L + G+  
Sbjct: 280 KTRYLSMEDNVHLPLIRIGFPTVYA-NHPDEAALDLLANILGGGKTSLVYKNLVKDGYAV 338

Query: 317 TLSAGGGVSGSNYREFAVSCVLTQEGLDHVDEIIQSLFQTLNLIATQGLQAWRYQEKRAV 376
             S          +    +    Q+G+  + E+ Q +  ++N    +G+     Q+ +  
Sbjct: 339 QASVSQPCQELACQMSIYALANPQKGVT-LAELEQRILASINEFEQRGVTDDDLQKVKVQ 397

Query: 377 LESAFRFQETQRPLDMVSHLVVNMQHYAPEDTAYGD---YMMSGYDEALLLHILSYLTPE 433
            E+   F   Q     VS+L +N   +   +    D   Y     D+ + +    Y+  +
Sbjct: 398 FEADTIF-GLQSVKGKVSNLALNQTLFGKPNKIASDLARYANVTKDDVMRV-FKKYIKDK 455

Query: 434 NLRATLIAKGGEYDKKAQWYFTPYSVRP--FTTEQLHRFRQPLDLPISLPEPNPFICYDL 491
            +    +   G          T     P  F  + L   +  ++  +    PN  +    
Sbjct: 456 PMVVMSVVPQG---------MTALVAHPDNFIAQMLPVAQTAVEGEL----PNAKLVSSF 502

Query: 492 DPSEVKESHT-----LPQVLQD--LPGFKLWHQQDTEFRVPKGVIYVAIDSPHAVANCRN 544
           D S++  +       +PQ+       G ++   Q  E    + VIY  ++  H +     
Sbjct: 503 DRSKMPATGAASVLKVPQIWTSKLANGIEVMGTQSIETPTVELVIY--LNGGHRLVPVEK 560

Query: 545 IVMTRLCVEMFLDALAKETYQ-----AEIAGMGYNLYAHQGGVTLTLSGFSQKLPQLMEV 599
             +  L  EM  ++  K + +      E+ G   +  A +   T+ +S  ++ L + + +
Sbjct: 561 AGLASLTAEMLNESTQKRSSEQLSQALEVLGSTVDFSASEYQSTIKVSALTEHLDETLAI 620

Query: 600 ILRKFAQRDFQPKRFATIKQQMTRNWRNAAHDKPISQLFNAMTGLLQPNN 649
           +  K  +  F    FA +KQQ  +  ++     P  Q   A+  LL  NN
Sbjct: 621 LEEKLFEPAFNEADFARVKQQQLQQIQH-MQSNPSYQASAALYSLLYGNN 669



 Score = 32.3 bits (72), Expect = 1e-04
 Identities = 42/201 (20%), Positives = 79/201 (39%), Gaps = 31/201 (15%)

Query: 32  LSNGLRTLLIQSPDVQKCAAALAVNVGHFDDPIERQGLAHYLEHMLFLGTEKYPKVGDFQ 91
           L+NG+  +  QS +       + +N GH   P+E+ GLA     ML   T+K  +  +  
Sbjct: 526 LANGIEVMGTQSIETPTVELVIYLNGGHRLVPVEKAGLASLTAEMLNESTQK--RSSEQL 583

Query: 92  TFISQHGGSNNAWTGTEH-TCFFFDVLPNAFAKALDRFSQFFIAPLFNAEALDKERQAVD 150
           +   +  GS   ++ +E+ +      L     + L    +    P FN     + +Q   
Sbjct: 584 SQALEVLGSTVDFSASEYQSTIKVSALTEHLDETLAILEEKLFEPAFNEADFARVKQ--- 640

Query: 151 SEYKLKIKDESRRLYQVQKETINPQHPFS----KFSVGNQHTLGDRENSSIRD------- 199
                      ++L Q+Q    NP +  S        GN + LG  +  ++         
Sbjct: 641 -----------QQLQQIQHMQSNPSYQASAALYSLLYGNNNALGVSDTGTLDSVAALTLA 689

Query: 200 EIIEFYQSHY---SAKLMTLS 217
           ++  FY   Y   +AK++T++
Sbjct: 690 DVQAFYAEQYRGANAKIITVA 710