Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., flagellar biosynthesis protein FlhA from Pseudomonas stutzeri RCH2

 Score =  874 bits (2259), Expect = 0.0
 Identities = 445/687 (64%), Positives = 554/687 (80%), Gaps = 15/687 (2%)

Query: 22  IGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTVLLIA 81
           +G P+++L  + M++L +P FLLDL FTFNIALS+VVLLV+VY  RPLDFA FPT+LL+A
Sbjct: 21  LGVPLLLLVMMGMMMLSVPPFLLDLLFTFNIALSIVVLLVSVYALRPLDFAVFPTILLVA 80

Query: 82  TLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIINFMVV 141
           TL+RLALNVASTRVVL+ GHEG  AAG+VIEAFGNVVIGGNY VG+VVF ILMIINF+VV
Sbjct: 81  TLMRLALNVASTRVVLINGHEGGSAAGHVIEAFGNVVIGGNYVVGIVVFAILMIINFVVV 140

Query: 142 TKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGSMDGA 201
           TKGAGRISEVSARFTLDA+PGKQMAIDADLNAGLIDQE+A+ RR EV+ EADFYGSMDGA
Sbjct: 141 TKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQEEAKKRRVEVSSEADFYGSMDGA 200

Query: 202 SKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPSLLLS 261
           SKFV+GDAIAG+LILFIN+IGG+ IGM Q+ + F EA ++Y LLTIGDGLVAQIPSLLLS
Sbjct: 201 SKFVRGDAIAGLLILFINLIGGVGIGMAQHGMSFSEAGQVYALLTIGDGLVAQIPSLLLS 260

Query: 262 IGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFLALLAS 321
             AAIMVTR  + EDMGQQV  Q+F +PKAL + A I+  MG+VPGMPH +FL L   A+
Sbjct: 261 TAAAIMVTRVTSSEDMGQQVQRQMFASPKALAVAAAIMIAMGLVPGMPHLSFLGLGAAAA 320

Query: 322 GAAYWL-HRK--------QKTKAENKNLPAKSDVETPTQRELSWDDVQPVDVIGLEVGYR 372
             AYW+ HRK        Q+ + + + LPA+   ET   +EL WDDV PVD++GLEVGYR
Sbjct: 321 AGAYWIWHRKKQVEKKAEQEVQKQQEMLPAQRSAET---KELGWDDVTPVDMVGLEVGYR 377

Query: 373 LIPLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEA 432
           LIPLVD++QGG+LL R+KGVRKKLSQD GFL+P VHIRDNL+L PN+YR+TLMGV++ EA
Sbjct: 378 LIPLVDRNQGGQLLARIKGVRKKLSQDLGFLMPSVHIRDNLDLLPNAYRLTLMGVSLAEA 437

Query: 433 EIRPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLAT 492
           E+ PD+ELAINPGQV+G ++G   RDPAFGL+AVWI   QR+ AQ+LGYTVVD+STV+AT
Sbjct: 438 EVYPDRELAINPGQVFGPLNGISARDPAFGLEAVWIEASQRDQAQSLGYTVVDASTVVAT 497

Query: 493 HLSQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIP 552
           HL+Q+L  +A +L+GHEEVQ LL++L++S+PKL E  VP  +SL  ++KVLQ LL E +P
Sbjct: 498 HLNQVLHKHAHELLGHEEVQQLLQLLAKSSPKLAEELVPGMVSLSTLLKVLQALLQEQVP 557

Query: 553 IRDIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQIL 612
           +RDIRTI + ++  A+KSQ+P  + AAVR++L R IVQ + G+EPELPVITL P LEQIL
Sbjct: 558 VRDIRTIAEAIANVAAKSQDPAAMVAAVRVALSRAIVQNVVGLEPELPVITLEPRLEQIL 617

Query: 613 HQTMQASG-GESAGI--EPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVK 669
             ++Q +G G   GI  EPG+AE+LQ +L  A Q QE+ G+PAVLL +G +R+ L++F +
Sbjct: 618 LNSLQKAGQGSEDGILLEPGMAEKLQRSLVEAAQRQEMLGKPAVLLVAGPVRAMLSRFAR 677

Query: 670 NTIPNLRVLSYQEIPDEKQIRIVQAVG 696
             +PN+ VL+YQEIPD KQ+ IV  VG
Sbjct: 678 LAVPNIHVLAYQEIPDNKQVTIVSTVG 704