Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 695 a.a., flagellar biosynthesis protein FlhA from Sinorhizobium meliloti 1021

 Score =  442 bits (1138), Expect = e-128
 Identities = 249/699 (35%), Positives = 427/699 (61%), Gaps = 27/699 (3%)

Query: 11  LPSIPQRSMPAIGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLD 70
           +P +  +S   +G  + ++  L+++ LP+P FL+DL   F+I+ S+++L+V ++ +RPLD
Sbjct: 9   IPKLAPKSRD-VGFALGIVMILSILFLPIPPFLIDLGLAFSISFSVLILMVALWIQRPLD 67

Query: 71  FAAFPTVLLIATLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVF 130
           F++FPT+LLI+T++RLALN+A+TRV+L +GHEG GAAG VI  F ++V+ G++ +GL+VF
Sbjct: 68  FSSFPTILLISTMIRLALNIATTRVILSHGHEGHGAAGGVISGFASLVMSGDFVIGLIVF 127

Query: 131 LILMIINFMVVTKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTK 190
           LIL+ +NF+V+TKGA RI+EV ARFTLDA+PGKQM+IDADL+AGLID+++A+ RR E+ +
Sbjct: 128 LILITVNFIVITKGATRIAEVGARFTLDAIPGKQMSIDADLSAGLIDEKEAQRRRRELEE 187

Query: 191 EADFYGSMDGASKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDG 250
           E+ F+G+MDGASKFV+GDAIAG++I  IN+ GG+ IG +++D+   EA +++  L++GDG
Sbjct: 188 ESSFFGAMDGASKFVRGDAIAGLIITAINVFGGIIIGYLRHDMEIGEAADVFVKLSVGDG 247

Query: 251 LVAQIPSLLLSIGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPH 310
           LV+QIP+L++S+ A ++++R  T     Q V+ QL   P+AL + +G++ ++ + PG+P 
Sbjct: 248 LVSQIPALIVSLAAGLLISRGGTAGSTDQAVVGQLSGYPRALMVASGLIVLLSVTPGLP- 306

Query: 311 FAFLFLALLASGAAY--WLHRKQKTKAENKNLPAKSDVETPTQRELSWDDVQPV------ 362
             FL  A L  G A+  W   KQ  +AE      +   +    +E   D V+ V      
Sbjct: 307 --FLPFAALGGGMAFLAWFIPKQ-IEAEKAAKRDEEAAKAQQSKESDKDSVKSVLKTAEI 363

Query: 363 -DVIGLEVGYRLIPLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYR 421
             ++G +V  RL+         EL  RV  +R+K +  +G ++P + + D++ +   +Y 
Sbjct: 364 ELLLGKQVSTRLL-----GAHQELAFRVGKMRRKFALQYGLVVPEIKVSDDITIPDKAYH 418

Query: 422 ITLMGVAVGEAEIRPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGY 481
           + + G  +    +R  + L +  G     + G+  R+PAFG+ AV I E   E  +  G+
Sbjct: 419 VRIHGTTIASNTVRVGEVLVVTGGGRRPSVPGDDIREPAFGMPAVSILETFTEDLKREGF 478

Query: 482 TVVDSSTVLATHLSQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVK 541
             +D+ +V+ THLS+++ NN  QL+ +++V+ L+E L     KL +      +S   +  
Sbjct: 479 HPIDNVSVVLTHLSEVIRNNLPQLLSYKDVKVLIERLDPEYRKLADEICTSHMSYSGLQA 538

Query: 542 VLQNLLHEAIPIRDIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEI--NGVEPEL 599
           VL+ LL E + IR++  I++ ++E A   ++ + +   VR+ + + +  ++  NGV   L
Sbjct: 539 VLKLLLAERVSIRNLHLILEAVAELAPHVRKTEQIVEHVRVRMSQQLCGDLADNGV---L 595

Query: 600 PVITLIPELEQILHQTMQASG-GE--SAGIEPGLAERLQMALSHATQEQELKGEPAVLLT 656
            V+ L  + + + HQ ++    GE     I+P   E      +   +E   +G P VL++
Sbjct: 596 RVLRLGNKWDMVFHQALKRDAKGEIVEFDIDPRHLEEFSEQATKVIREHLDRGMPFVLVS 655

Query: 657 SGVLRSTLAKFVKNTIPNLRVLSYQEIPDEKQIRIVQAV 695
           S   RS +   ++     L VLS+ E+    +I+I+ ++
Sbjct: 656 SPESRSYVRMIIERLFATLPVLSHVELAKGLEIKIIGSI 694