Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 699 a.a., flagellar biosynthesis protein FlhA (RefSeq) from Shewanella amazonensis SB2B

 Score =  975 bits (2520), Expect = 0.0
 Identities = 495/682 (72%), Positives = 585/682 (85%), Gaps = 3/682 (0%)

Query: 18  SMPAIGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTV 77
           ++  +G P +VLAALAM+VLPMPAFLLD+ F+FNIAL+LVVLLV +YT RPLDFAAFPTV
Sbjct: 17  NLQGLGTPALVLAALAMIVLPMPAFLLDILFSFNIALALVVLLVAIYTNRPLDFAAFPTV 76

Query: 78  LLIATLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIIN 137
           LL+ATLLRLALNVASTRVVLL GH G  AAG VIEAFG+VVIGGNYAVGLVVFLIL+IIN
Sbjct: 77  LLVATLLRLALNVASTRVVLLEGHNGADAAGKVIEAFGSVVIGGNYAVGLVVFLILIIIN 136

Query: 138 FMVVTKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGS 197
           F VVTKGAGRISEVSARFTLDA+PGKQMAIDADLNAGLI+QEQAR RR EVTKEADFYG+
Sbjct: 137 FAVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLINQEQARTRRAEVTKEADFYGA 196

Query: 198 MDGASKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPS 257
           MDGASKFVKGDAIAGI+IL INI+GG  IGM+Q+DL F +A+EIYTLLTIGDGLVAQIP 
Sbjct: 197 MDGASKFVKGDAIAGIMILVINILGGFVIGMVQHDLAFMDAVEIYTLLTIGDGLVAQIPG 256

Query: 258 LLLSIGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFLA 317
           LLLSI AA+MVTRQN + DMG  V+ Q+FDNPK+L I AG+LF+MGIVPGMPH AFL  A
Sbjct: 257 LLLSIAAALMVTRQNEEGDMGGMVMSQMFDNPKSLAIAAGVLFIMGIVPGMPHLAFLTFA 316

Query: 318 LLASGAAYWLHRK-QKTKAENKNLPAKSDVET--PTQRELSWDDVQPVDVIGLEVGYRLI 374
           +     AY+LH++ +K K +     A   VE    + +EL WDDV+ VD IGLEVGYRLI
Sbjct: 317 VATGAGAYFLHKRIEKRKQQALEAAASGSVEKLDNSPKELGWDDVRHVDTIGLEVGYRLI 376

Query: 375 PLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEAEI 434
           PLVDK QGGELL R+KGVRKKLSQ+ GFL+P VHIRDNL+L P++YRI+LMGV VGEAEI
Sbjct: 377 PLVDKGQGGELLSRIKGVRKKLSQELGFLVPAVHIRDNLDLAPSTYRISLMGVVVGEAEI 436

Query: 435 RPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLATHL 494
           R D ELAINPGQV+G +DG  TRDPAFGL+AVWI  + REHAQ LGYTVVD++TV+ATH+
Sbjct: 437 RHDCELAINPGQVFGQLDGVTTRDPAFGLEAVWIAPELREHAQTLGYTVVDAATVVATHI 496

Query: 495 SQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIPIR 554
           SQ L+NNA++L+G+EEVQ LL++L++ +PKLV+ F+PD +SLG VVKV+QNLL+E + +R
Sbjct: 497 SQTLSNNASKLLGYEEVQQLLDILAKHSPKLVDGFIPDVMSLGTVVKVMQNLLNEGVSVR 556

Query: 555 DIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQILHQ 614
           D+RTIVQTL EY +KS + ++LTAAVRI+LKR+IVQEI G E E+PVITL PELEQ+LHQ
Sbjct: 557 DLRTIVQTLLEYGTKSGDTEVLTAAVRIALKRMIVQEIAGPEAEIPVITLAPELEQMLHQ 616

Query: 615 TMQASGGESAGIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVKNTIPN 674
           +MQASGG+   IEPGLAER+Q +L+ A Q QE+ G+PA+LLTSG+LRSTL++FVK TIPN
Sbjct: 617 SMQASGGDGPNIEPGLAERMQQSLADAAQRQEMVGQPAILLTSGMLRSTLSRFVKYTIPN 676

Query: 675 LRVLSYQEIPDEKQIRIVQAVG 696
           LRV+SYQEIPDEKQIRIV AVG
Sbjct: 677 LRVISYQEIPDEKQIRIVSAVG 698