Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 707 a.a., flagellar biosynthesis protein FlhA from Pseudomonas aeruginosa PA14

 Score =  873 bits (2256), Expect = 0.0
 Identities = 446/685 (65%), Positives = 554/685 (80%), Gaps = 9/685 (1%)

Query: 21  AIGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTVLLI 80
           ++G PV++LA LAM+ LP+P FLLD+ FTFNIALS+VVLLV VY  RPLDFA FPT+LL+
Sbjct: 21  SLGVPVLLLAMLAMMTLPIPPFLLDVLFTFNIALSIVVLLVCVYALRPLDFAVFPTILLV 80

Query: 81  ATLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIINFMV 140
           ATLLRLALNVASTRVVLL+GH+G GAAG VI+AFG VVIGGNY VG+VVF ILMIINF+V
Sbjct: 81  ATLLRLALNVASTRVVLLHGHDGHGAAGKVIQAFGEVVIGGNYVVGVVVFAILMIINFVV 140

Query: 141 VTKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGSMDG 200
           VTKGAGRISEVSARFTLDA+PGKQMAIDADLNAGLI+QE+A+ RR EV +EADFYGSMDG
Sbjct: 141 VTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIEQEEAKKRRSEVAQEADFYGSMDG 200

Query: 201 ASKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPSLLL 260
           ASKFV+GDAIAG+LILFIN+IGG++IGMIQ+ + F +A ++Y LLTIGDGLVAQ+PSLLL
Sbjct: 201 ASKFVRGDAIAGLLILFINLIGGVAIGMIQHSMSFGDAGKVYALLTIGDGLVAQLPSLLL 260

Query: 261 SIGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFLALLA 320
           S  AAIMVTR ++ EDMGQQV  Q+F +PKAL I+A IL  MG VPGMPH +F+ L  LA
Sbjct: 261 STAAAIMVTRVSSSEDMGQQVNRQMFASPKALAISAAILIAMGAVPGMPHVSFIGLGALA 320

Query: 321 SGAAYWL-HRKQKTKAENKNLPAKSDVETPTQR-----ELSWDDVQPVDVIGLEVGYRLI 374
             AAYW+ HR+ K K   +    +     P QR     EL WDDV PVD++GLEVGYRLI
Sbjct: 321 GAAAYWIWHRQNKAKQVAEQEVQRQQELLPAQRAQEVKELGWDDVTPVDMVGLEVGYRLI 380

Query: 375 PLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEAEI 434
           PLVD++QGG+LL R+KGVRKKLSQ+ GFL+P VHIRDNL+L PN+YR+TLMGV+V EAEI
Sbjct: 381 PLVDRNQGGQLLARIKGVRKKLSQELGFLMPSVHIRDNLDLLPNAYRLTLMGVSVAEAEI 440

Query: 435 RPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLATHL 494
            PD+ELAINPGQV+G ++G   +DPAFGL+AVWI   QR+ AQ+LGYTVVD+STV+ATHL
Sbjct: 441 YPDRELAINPGQVFGSLNGIAGKDPAFGLEAVWIEPGQRDQAQSLGYTVVDASTVVATHL 500

Query: 495 SQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIPIR 554
           +Q+L  +A +L+GHEEVQ LL++L+RS+PKL E  VP  +SL  ++KVLQ LL E +P+R
Sbjct: 501 NQVLHKHAHELLGHEEVQQLLQLLARSSPKLAEELVPGLISLSTLLKVLQALLQEQVPVR 560

Query: 555 DIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQILHQ 614
           DIRTI + ++  A +SQ+P  + AAVR++L R IVQ I G+EPELPVITL P LEQIL  
Sbjct: 561 DIRTIAEAIANVAPRSQDPGAMVAAVRVALSRAIVQSIVGLEPELPVITLEPRLEQILLN 620

Query: 615 TMQASG-GESAG--IEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVKNT 671
           +MQ +G G   G  +EPG+AE+LQ +L  + Q QE+ G+PA+LL +G +RS +++F +  
Sbjct: 621 SMQKAGQGSEDGMLLEPGMAEKLQRSLIESAQRQEMLGKPAILLVAGPIRSMMSRFARMA 680

Query: 672 IPNLRVLSYQEIPDEKQIRIVQAVG 696
           +P++ VL+YQEIPD KQ+ IV  VG
Sbjct: 681 VPSMHVLAYQEIPDNKQVTIVATVG 705