Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 703 a.a., flagellar biosynthesis protein FlhA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  576 bits (1485), Expect = e-168
 Identities = 304/675 (45%), Positives = 443/675 (65%), Gaps = 9/675 (1%)

Query: 28  VLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTVLLIATLLRLA 87
           V+  L ++++P+P F LD+  + +I+LSLV+L+ +++   PL+F+ FP++LL+ TLLRLA
Sbjct: 28  VVTILFVMLVPLPTFFLDMLLSLSISLSLVILVTSMFMLSPLEFSIFPSLLLVTTLLRLA 87

Query: 88  LNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIINFMVVTKGAGR 147
           LNVASTR++LL+G EG  AAG VI+AFG  V+GGNY +G V+F+IL I+N +V+T G  R
Sbjct: 88  LNVASTRLILLHGDEGTDAAGQVIQAFGEFVVGGNYVIGAVIFMILFILNKIVITAGTTR 147

Query: 148 ISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGSMDGASKFVKG 207
           I+EV+ARFTLDA+PGKQMAI+ADLNAGLID+E+A  RR  + KEADFYG+MDGA KFV+G
Sbjct: 148 IAEVAARFTLDAMPGKQMAIEADLNAGLIDEEEATARRTNIRKEADFYGAMDGAGKFVQG 207

Query: 208 DAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPSLLLSIGAAIM 267
           D  AG+ I  IN++GG+ +G+ Q D+ +++A+  YTLL+IGDGLVA IPS+++S  A ++
Sbjct: 208 DVNAGMFITIINVVGGILLGVFQKDMEWRDALTTYTLLSIGDGLVATIPSIIVSTAAGLI 267

Query: 268 VTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFLALLASGAAYWL 327
           V+R   +  MG++ + QL  N +AL + +G+L +  +VPG+P   FL       G +  +
Sbjct: 268 VSRAAAEAKMGEEFVGQLSYNSRALKLVSGVLMLFALVPGLPTLPFLTFGAGLYGMSRLV 327

Query: 328 HRKQ--KTKAENKN----LPAKSDVETPTQRELSWDDVQPVDVIGLEVGYRLIPLVDKDQ 381
             KQ  +  AE K        K D    T  E+    + P+D + LEVGY LIPLVD+DQ
Sbjct: 328 GDKQDAEAAAEAKGGKGAKGKKKDGSLDTPEEV--QTLLPLDTLELEVGYGLIPLVDEDQ 385

Query: 382 GGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEAEIRPDQELA 441
            G LL R++ +R++ + D G ++P +H+RDNL+L P  Y + + G  V  AEI  D  LA
Sbjct: 386 NGNLLSRIRSIRRQFALDMGVVVPSLHLRDNLQLKPGQYCVLVKGNQVASAEILVDHYLA 445

Query: 442 INPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLATHLSQLLTNN 501
           ++PG     I G  TR+PAF L A+WI E Q+E A   GYTVVD STV+ATHL+++   +
Sbjct: 446 MDPGNAKHRIRGIETREPAFNLPALWIPESQKEEAMLAGYTVVDPSTVIATHLTEVFKRH 505

Query: 502 AAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIPIRDIRTIVQ 561
               +G +EVQ LL+ L++ APK VE  VP  L LG V KVLQNL+ E + IRD+ TI +
Sbjct: 506 LGDFLGRQEVQGLLDNLAKHAPKAVEELVPGILPLGTVQKVLQNLVRENVSIRDLLTIAE 565

Query: 562 TLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQILHQTM-QASG 620
           TL++Y    +  D LT  VR  L R IV++    E  LP++TL   +E+ + + + Q  G
Sbjct: 566 TLADYGPAVKNADTLTEYVRERLSRSIVKQYMDSEGGLPIVTLDQAVEKTVQEAIRQTDG 625

Query: 621 GESAGIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVKNTIPNLRVLSY 680
           G    + PG+A+RL   +++A +         V+L S V R  LA+ +   +PN+ V+S 
Sbjct: 626 GNYLALNPGIAQRLIQRVNNAVERAVNTDGQPVILASPVARPHLAQLLMRFLPNVPVISQ 685

Query: 681 QEIPDEKQIRIVQAV 695
            EIP + +++ V +V
Sbjct: 686 AEIPSDIRLQAVGSV 700