Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 696 a.a., flagellar biosynthesis protein FlhA from Sphingomonas koreensis DSMZ 15582

 Score =  600 bits (1547), Expect = e-176
 Identities = 320/681 (46%), Positives = 452/681 (66%), Gaps = 6/681 (0%)

Query: 18  SMPAIGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTV 77
           ++ +   PV +L  +AM+V+P+P FLLD FF  NI +SL VL+V +  ++PLDF+AFPTV
Sbjct: 13  ALKSFALPVAILVLVAMMVVPVPTFLLDAFFIMNIVISLAVLMVALNAQKPLDFSAFPTV 72

Query: 78  LLIATLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIIN 137
           LL ATL RL LNVASTRVVL +GHEG  AAG+VIEAFG  +IGG+Y VGL VF IL+IIN
Sbjct: 73  LLFATLFRLGLNVASTRVVLGHGHEGEAAAGHVIEAFGTFMIGGDYVVGLFVFAILIIIN 132

Query: 138 FMVVTKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGS 197
            +VVTKGAGR+SEVSARFTLDALPGKQMAIDADLNAGLI  ++A+ RR EV  EADFYG+
Sbjct: 133 MIVVTKGAGRVSEVSARFTLDALPGKQMAIDADLNAGLITPDEAKARRVEVATEADFYGA 192

Query: 198 MDGASKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPS 257
           MDG+SKFVKGDAIAG+LILFINIIGGL +G + + L   EA + Y LL IGD LVAQ+P+
Sbjct: 193 MDGSSKFVKGDAIAGLLILFINIIGGLILGPVSHGLTIGEAAQTYVLLAIGDALVAQLPA 252

Query: 258 LLLSIGAAIMVTRQNTDEDMG-QQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFL 316
           LLLSI AA +VTR + +++ G    I   F + K  T  A I+ ++G++PGMP F  L  
Sbjct: 253 LLLSIAAAAIVTRVSANKEQGLTDQIGSQFGSHKTWTPVAVIVGLLGLLPGMPAFIIL-P 311

Query: 317 ALLASGAAYWLHRKQKTKAENKNLPAKS-DVETPTQRELSWDDVQPVDVIGLEVGYRLIP 375
           A   SG   W   K    ++    P ++ D E     ++ WD+V     + +++GY L+P
Sbjct: 312 AAAGSGFMAW---KMYQASKRPPAPVETIDAEPADPSKIGWDEVTDNMQVMIDIGYGLVP 368

Query: 376 LVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEAEIR 435
           L+D+ +GG L+ R+ GVR++LS++ GF++P V +RD++ + P +YRI + GV +GE  + 
Sbjct: 369 LIDERRGGSLMGRITGVRRQLSKELGFVVPQVRVRDDINMGPFTYRIVVGGVVIGEDSVS 428

Query: 436 PDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLATHLS 495
           PD+ LA++ GQ  G ++G+  +DP FGLDA+WI     + A   G+ VVD  TV+ATHL+
Sbjct: 429 PDEVLALDTGQAVGTLNGKPVKDPTFGLDAMWISSADADAATGQGWLVVDPGTVMATHLN 488

Query: 496 QLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIPIRD 555
           Q L  NAA L+G +EVQ LL+ L   A +LV +  P+ L +  + +VL+ LL E IP+++
Sbjct: 489 QALITNAADLLGPDEVQALLDGLRERAAQLVSSLSPNPLPITTLTQVLRGLLAENIPLKE 548

Query: 556 IRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQILHQT 615
            R I   ++  A K+ + D +   +R  L  LI+Q + GV   L V+TL  +LE +L Q 
Sbjct: 549 FRRIAAAIAMAAQKTLDADEIIETIRPELGPLIIQRLCGVREPLRVMTLEGQLEALLGQA 608

Query: 616 MQASGGESAGIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVKNTIPNL 675
           +++   +   IEP L  R+  AL  A Q    + +P  L+    +R  + K V+  +P+ 
Sbjct: 609 IRSDPAKRHTIEPDLGRRIVDALQRAAQPLVAEAKPFALVVQPSIRIAIRKLVRTCLPDT 668

Query: 676 RVLSYQEIPDEKQIRIVQAVG 696
            V+S+ E+P++K + +V  +G
Sbjct: 669 PVMSFFEVPEDKSVEVVAVIG 689