Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 699 a.a., flagellar biosynthesis protein FlhA from Dyella japonica UNC79MFTsu3.2

 Score =  837 bits (2162), Expect = 0.0
 Identities = 427/693 (61%), Positives = 547/693 (78%), Gaps = 4/693 (0%)

Query: 8   ADKLPSIPQRSMPAIGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRR 67
           A    +  Q S    GAP+++LAALAMV+LPMP FLLD+ F+FNIALSLV+LL  +Y  R
Sbjct: 6   ASAFDTFKQISRRGAGAPIVMLAALAMVMLPMPPFLLDILFSFNIALSLVILLAVIYVMR 65

Query: 68  PLDFAAFPTVLLIATLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGL 127
           PL+FAAFPTV+L+ATLLRLALN+ASTRVVLL+GH GPGAAG VIEAFG  VIGGN+AVGL
Sbjct: 66  PLEFAAFPTVVLMATLLRLALNIASTRVVLLHGHNGPGAAGKVIEAFGEFVIGGNFAVGL 125

Query: 128 VVFLILMIINFMVVTKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFE 187
           VVF IL IINF+VVTKGA R+SEV+ARFTLDA+PGKQMAIDADLNAGL+ QEQAR RR E
Sbjct: 126 VVFAILTIINFVVVTKGATRVSEVTARFTLDAMPGKQMAIDADLNAGLLTQEQARERRQE 185

Query: 188 VTKEADFYGSMDGASKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTI 247
           V +EADFYGSMDGASKFV+GDA AGILIL INI+GG  +G++Q+ L   +A + YTLLTI
Sbjct: 186 VREEADFYGSMDGASKFVRGDATAGILILVINIVGGFFVGVMQHGLSAGDAAKTYTLLTI 245

Query: 248 GDGLVAQIPSLLLSIGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPG 307
           GDGLVAQ+P+L+LSI  A++VTR +  +DMG+QV+ Q+F  P+AL +   +L VMG+VPG
Sbjct: 246 GDGLVAQVPALMLSISTAVIVTRVSRAQDMGKQVLGQVFGQPRALAVAGVVLGVMGLVPG 305

Query: 308 MPHFAFLFLALLASGAAYWL---HRKQKTKAENKNLPAKSDVETPTQR-ELSWDDVQPVD 363
           MP+ AFL L  +  GAA+ +    R+ + K   + +   +    P +R EL W+DV  VD
Sbjct: 306 MPNIAFLLLGAICGGAAWMMVKRERETREKLAEEAIAEATPATPPAERLELGWEDVAGVD 365

Query: 364 VIGLEVGYRLIPLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRIT 423
            +GLEVGYRLIPLVDK+QGGEL+ R+K VR+KLSQ+ GFL+PPVHIRDNL+L PN+YRIT
Sbjct: 366 PVGLEVGYRLIPLVDKNQGGELMGRIKSVRRKLSQELGFLVPPVHIRDNLDLGPNTYRIT 425

Query: 424 LMGVAVGEAEIRPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTV 483
           LMGV +GEAE+  ++ LAINPG+V+G + G  TRDPAFGL+AVWI   QR++AQALGYTV
Sbjct: 426 LMGVPMGEAEVHNERLLAINPGRVHGTLQGIATRDPAFGLEAVWIEAGQRDNAQALGYTV 485

Query: 484 VDSSTVLATHLSQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVL 543
           VD +TV+ATHLS +L  +A +L+ H++VQ LL+ L+  APKLVE+ VP ++SLGVVVKVL
Sbjct: 486 VDPATVVATHLSHILQGHAHELLSHQDVQQLLDRLAAVAPKLVEDLVPKRMSLGVVVKVL 545

Query: 544 QNLLHEAIPIRDIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVIT 603
           QNLL E +P+R++R+IV++L+E+A +SQ+P  LTAAVR++L R IVQEI G+  E+PVIT
Sbjct: 546 QNLLAERVPVRNMRSIVESLAEHAGQSQDPGALTAAVRVALGRQIVQEIAGLGTEIPVIT 605

Query: 604 LIPELEQILHQTMQASGGESAGIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRST 663
           L PELEQIL  ++   G   A +EPGLA+RLQ  ++ A + QE+ GEPAVLL +  LR  
Sbjct: 606 LAPELEQILLGSLANGGVAGAAVEPGLADRLQSGVADAARRQEMSGEPAVLLVAPQLRPW 665

Query: 664 LAKFVKNTIPNLRVLSYQEIPDEKQIRIVQAVG 696
           LA+F ++   NL VL+Y E+PD +++R+VQA+G
Sbjct: 666 LARFTRHVAQNLHVLAYNEVPDNRRVRLVQALG 698