Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 703 a.a., flagellar biosynthetic protein FlhA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  570 bits (1468), Expect = e-166
 Identities = 312/680 (45%), Positives = 443/680 (65%), Gaps = 18/680 (2%)

Query: 28  VLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTVLLIATLLRLA 87
           V+  L ++++P+P F LD+    +I+LSLV+L+ +++   PL+F+ FP++LL+ TLLRLA
Sbjct: 28  VVTILFVMLVPLPTFFLDILLCCSISLSLVILVTSMFMMSPLEFSIFPSLLLVTTLLRLA 87

Query: 88  LNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIINFMVVTKGAGR 147
           LNVASTR++LL+G EG  AAG VI AFG  V+GG+Y +G V+F+IL I+N  V+T G  R
Sbjct: 88  LNVASTRLILLHGDEGTDAAGEVIRAFGEFVVGGSYVIGAVIFMILFILNKNVITAGTTR 147

Query: 148 ISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGSMDGASKFVKG 207
           I+EV+ARFTLDA+PGKQMAI+ADLNAGLID+ +A  RR  + KEADFYG+MDGA KFV G
Sbjct: 148 IAEVAARFTLDAMPGKQMAIEADLNAGLIDETEANERRKNIRKEADFYGAMDGAGKFVSG 207

Query: 208 DAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPSLLLSIGAAIM 267
           D  AG+ I  INIIGGL +G+IQ D+ +++A+  YTLLT+GDGLV+ IPS+++S  A I+
Sbjct: 208 DVNAGMFITLINIIGGLLVGIIQKDMPWRDALTTYTLLTVGDGLVSTIPSIIVSTAAGII 267

Query: 268 VTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFL-------FLALLA 320
           V+R  ++  MG++ + QL  N +A+ + +G+L +  +VPG+P   FL       F A L 
Sbjct: 268 VSRAASEAKMGEEFLGQLTYNSRAMRLVSGVLLLFALVPGLPTVPFLIFSASLFFFAKLL 327

Query: 321 SGAAYWLHRKQKTKAENKNLPAKSD-VETPTQRELSWDDVQPVDVIGLEVGYRLIPLVDK 379
                   +    +A  K    K D ++TP + +     + P+D + LEVGY LIPLVD+
Sbjct: 328 GDRDGDEAQGDAKRAGGKAAKGKGDSLDTPEEVQA----LLPLDALELEVGYGLIPLVDE 383

Query: 380 DQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEAEIRPDQE 439
           +Q G LL R++ +R++ + D G +IP +H+RDNL+L P  Y + + G  V  AEI  D  
Sbjct: 384 EQNGNLLTRIRSIRRQFALDMGVVIPSLHLRDNLQLKPGQYALLIKGNQVTSAEILIDHL 443

Query: 440 LAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLATHLSQLLT 499
           LA++PG     I G  TR+PAF L A+WI E Q+E A   GYTVVD STV+ATHL+++  
Sbjct: 444 LAMDPGTARHRIQGIETREPAFNLPALWIPESQKEEAMLAGYTVVDPSTVIATHLTEVFR 503

Query: 500 NNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIPIRDIRTI 559
            + ++ +G +EVQ LL+ LS+ APK VE  VP  LSLGVV KVLQNL+ E + +RD+ ++
Sbjct: 504 RHLSEFLGRQEVQGLLDNLSKHAPKAVEELVPGVLSLGVVQKVLQNLVRENVSVRDLLSV 563

Query: 560 VQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQILHQTM-QA 618
           V+TL++Y    + PD LT  VR  L R IV+     E  LP+ITL   +E+ L  ++ Q 
Sbjct: 564 VETLADYGPAIKNPDTLTEYVRERLARSIVKPHMDSEGTLPIITLDANVERTLQDSIRQT 623

Query: 619 SGGESAGIEPGLAERL-QMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVKNTIPNLRV 677
            GG    + P  A+RL Q   +         G+P VL   G  R  LA+ +   +PN+ V
Sbjct: 624 EGGAYLALNPSTAQRLIQSVNTQVENAVGTDGQPVVLTQPGT-RPHLAQLLMRFLPNIPV 682

Query: 678 LSYQEIPDEKQIRIVQAVGN 697
           LS  EIP + ++   QAVGN
Sbjct: 683 LSQAEIPPDIRL---QAVGN 699