Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., Flagellar biosynthesis protein FlhF from Pseudomonas fluorescens FW300-N2E2

 Score =  251 bits (640), Expect = 5e-71
 Identities = 165/476 (34%), Positives = 259/476 (54%), Gaps = 60/476 (12%)

Query: 1   MKIKRFFAKDMKTALLQVKEELGVDAVIMSNKKVAGGVEIVAAVDGDTAPAPAKRYNSQP 60
           M++KRFFA DM+ A+  V++ELG +A I+ N+++AGGVE+ AA+D        K     P
Sbjct: 1   MQVKRFFAADMRQAMKLVRDELGAEAAIIGNRRIAGGVELTAALD-------YKLSALAP 53

Query: 61  RHGYNQVSPSVAPTKSR-ELADDRVSLQSSADSGRSMTQR--FANMLKQYSSADEQEHRA 117
           R    ++   +  T+SR   A   +SL+SS   G + T R  FA                
Sbjct: 54  RVPNMELEDELRKTQSRIASAQAELSLRSSEGEGAAGTNRQLFAGQ-------------- 99

Query: 118 ENEDSLSALLKRQSENRAPQRNQTQRSQSSSERQRPDSPLGKLLQEDADARRKPRLDPTR 177
                L+A L   +     +       Q+ +E +RP         E A A     +DP  
Sbjct: 100 ----PLTAGLPLTAAEPLIE-------QAHAEPRRP---------EPAPAAPARGVDPRA 139

Query: 178 YDRKVPEEPMVAVSELESMREEMTSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLERMG 237
                          L+SMR E+ S+R L+E Q+  L W +++   P +A L +RL+R+G
Sbjct: 140 ---------------LDSMRFELNSLRELMEVQLGSLAWNQLQGSRPAQANLWRRLQRIG 184

Query: 238 VSLEMADQLACYIPEETPPPKAWKALLGLVSDQIPVVKHDILKRGGVVALLGPTGVGKTT 297
           +S  ++  L   I +   P +AW+ LL  ++  I   + + L+ GGV+A++GP G+GKTT
Sbjct: 185 LSGPLSRDLLALINDIEEPRQAWRMLLAHLARMIATPEVEPLEEGGVIAMVGPAGMGKTT 244

Query: 298 TVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVRVAKDSNELADVIYQ 357
           T+AKLAAR  ++YG+ ++ALV+ D++RIGA EQL   GRI+   V        LA  +  
Sbjct: 245 TLAKLAARYVLKYGAQSIALVSMDSFRIGAQEQLKTLGRILNVSVTHVDPGQSLAQALEP 304

Query: 358 LRNRRLILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYLVLPATAQRKVLQETIEHFRR 417
           L  +R++L+DTAG+   D  L  QL++L    G    +YLVL  T+Q++VL      ++R
Sbjct: 305 LLRKRVVLIDTAGLQASDPALRMQLESLAGR-GIKSKNYLVLATTSQKQVLTAAYHSYKR 363

Query: 418 IPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIANGQRVPEDIVIAQPKYMVAKA 473
             L+GCI+TKLDE  SLGE +S+ + + LPVAY+ +G R+P+D+ + +   +V++A
Sbjct: 364 CGLAGCILTKLDETASLGEVLSLAIGHELPVAYLTDGPRIPDDLHLPRRHQLVSRA 419