Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., signal recognition particle protein from Pseudomonas stutzeri RCH2

 Score = 54.7 bits (130), Expect = 7e-12
 Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 10/180 (5%)

Query: 284 VVALLGPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVR 343
           VV + G  G GKTTTV KL AR   E     V +V+ D YR  A +QL      +G    
Sbjct: 102 VVLMAGLQGAGKTTTVGKL-ARFLKERKKKTVLVVSADVYRPAAIKQLETLAAEVGVTFF 160

Query: 344 VAKDSNELADVIY------QLRNRRLILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYL 397
            +  S +  D+        +L+   ++LVDTAG    D  +  ++  +          ++
Sbjct: 161 PSDISQKPVDIAQAAIREAKLKFIDVVLVDTAGRLAIDAEMMAEIQAVHAAINPAETLFV 220

Query: 398 VLPATAQRKVLQETIEHF-RRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIANGQR 456
           V   T Q      T   F   +PL+G ++TK+D     G  +SV      P+ ++  G++
Sbjct: 221 VDAMTGQDAA--NTARAFGEALPLTGVVLTKVDGDARGGAALSVRHVTGKPIKFLGMGEK 278