Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., flagellar biosynthetic protein FlhF from Pseudomonas stutzeri RCH2

 Score =  227 bits (578), Expect = 7e-64
 Identities = 118/284 (41%), Positives = 183/284 (64%), Gaps = 1/284 (0%)

Query: 193 LESMREEMTSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLERMGVSLEMADQLACYIPE 252
           +E+M+ E+  +R L+E Q+  + W + + R P +A L +RL+R+G+  E++  L   +  
Sbjct: 120 IEAMQSELHGLRELIEVQLGSIAWGQEQSRRPQQAGLWRRLQRLGLPAELSRSLLEKVAG 179

Query: 253 ETPPPKAWKALLGLVSDQIPVVKHDILKRGGVVALLGPTGVGKTTTVAKLAARAAMEYGS 312
            T P +AW+ +L  ++  I V K + L+ GGV+AL+GP GVGKTTT+AKLAAR  ++YG+
Sbjct: 180 ITEPRQAWRMVLAYLAQAIKVSKTEPLEEGGVIALVGPAGVGKTTTLAKLAARYVLKYGA 239

Query: 313 DNVALVTTDTYRIGAHEQLSIYGRIMGCPVRVAKDSNELADVIYQLRNRRLILVDTAGMG 372
            N+ALV+ D YRIGA EQL   GRI+  PV     S  L+  +  L  +R+IL+DTAG+ 
Sbjct: 240 QNIALVSMDNYRIGAQEQLKTLGRILDVPVLQIDPSQSLSKTLAPLARKRVILIDTAGLP 299

Query: 373 QRDVRLSEQLDTLMQESGETIHSYLVLPATAQRKVLQETIEHFRRIPLSGCIMTKLDECL 432
             D  L  QL+ L  + G    +YLVL AT+Q +VL+    ++RR  L+GCI+TKLDE  
Sbjct: 300 ASDPTLRMQLEAL-SDRGVKSKNYLVLAATSQSQVLKAAWHNYRRCGLAGCILTKLDEAG 358

Query: 433 SLGEFVSVVVQNALPVAYIANGQRVPEDIVIAQPKYMVAKANEL 476
           SLG+ + + +   LP+AY+A+G R+P+D+ + +   +V++A  L
Sbjct: 359 SLGDVLGLTISQHLPIAYLADGPRIPDDLHLPRSHQLVSRAVSL 402



 Score = 63.5 bits (153), Expect = 1e-14
 Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 15/153 (9%)

Query: 1   MKIKRFFAKDMKTALLQVKEELGVDAVIMSNKKVAGGVEIVAAVDGDTAPAP-------- 52
           M++KRFFA DM+ A+  V++ELG DAVI+ N++VAGGVE+ A +D     AP        
Sbjct: 1   MQVKRFFAADMRIAMKMVRDELGADAVIIGNRRVAGGVELTAVLDYPMQSAPAANKPNPA 60

Query: 53  --AKRYNSQPRHGYNQVSPSVAP---TKSRELADDRVSLQSSADSGRSMTQRFANMLKQY 107
             A+   +Q R        S AP    + R+L D++ +  S            A   +  
Sbjct: 61  LEAELRKTQARLANAHAELSAAPRAKMQDRQLVDEKPAAVSIPQPSAVAEAAAAVDSRAI 120

Query: 108 SSADEQEH--RAENEDSLSALLKRQSENRAPQR 138
            +   + H  R   E  L ++   Q ++R PQ+
Sbjct: 121 EAMQSELHGLRELIEVQLGSIAWGQEQSRRPQQ 153