Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., signal recognition particle subunit FFH/SRP54 (srp54) from Pseudomonas syringae pv. syringae B728a

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 8/179 (4%)

Query: 284 VVALLGPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVR 343
           V+ + G  G GKTTT  KLA R   E     V +V+ D YR  A +QL      +G    
Sbjct: 102 VILMAGLQGAGKTTTAGKLA-RFLKERKKKTVMVVSVDVYRPAAIKQLETLANDIGVTFF 160

Query: 344 VAKDSNELADVIYQ-LRNRRL-----ILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYL 397
            +  S +  D+    ++  RL     ++VDTAG    DV +  ++  L   + +   +  
Sbjct: 161 ASDISQKPVDIAQAAIKEARLKFIDVVIVDTAGRLHVDVEMMGEIQAL-HAAVKPAETLF 219

Query: 398 VLPATAQRKVLQETIEHFRRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIANGQR 456
           V+ A   +            +PL+G I+TK+D     G  +SV      P+ +I  G++
Sbjct: 220 VVDAMTGQDAANTAKAFGDALPLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEK 278