Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., signal recognition particle subunit FFH/SRP54 (srp54) from Synechococcus elongatus PCC 7942

 Score = 65.9 bits (159), Expect = 3e-15
 Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 16/212 (7%)

Query: 284 VVALLGPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPV- 342
           V+ + G  G GKTT  AKLA     E  S    LV TD YR  A +QL   G+ +  PV 
Sbjct: 113 VILMAGLQGAGKTTATAKLALHLRKEGRS--TLLVATDVYRPAAIDQLITLGKQIDVPVF 170

Query: 343 RVAKDSNELADVIYQLRNRR-----LILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYL 397
            +  D+N +      +   R      ++VDTAG  Q D  + E+L   ++E+       L
Sbjct: 171 ELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQIDTEMMEEL-AQVKEAIAPHEVLL 229

Query: 398 VLPATAQRKVLQETIEHFRRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIANGQRV 457
           V+ +   ++    T     RI ++G I+TKLD     G  +S+   +  P+ ++  G++V
Sbjct: 230 VVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGGAALSIRRVSGQPIKFVGLGEKV 289

Query: 458 PEDIVIAQPKYMVAK------ANELLEKSTED 483
            E +    P+ M ++         L+EK+ E+
Sbjct: 290 -EALQPFHPERMASRILGMGDVLTLVEKAQEE 320