Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., GTP-binding signal recognition particle SRP54, G-domain (NCBI) from Rhodospirillum rubrum S1H

 Score = 67.8 bits (164), Expect = 6e-16
 Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 11/177 (6%)

Query: 285 VALLGPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVRV 344
           + L+GP G GKT  VAKLAARA +   +  V ++T D+ R GA EQL+ + RI+   ++ 
Sbjct: 153 ILLVGPPGTGKTIAVAKLAARARLSGRA--VGVITADSVRAGAQEQLAAFTRILEIDLKK 210

Query: 345 AKDSNELADVIYQLRNR-RLILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYLVLPATA 403
           A+  + LA ++  ++ +  +I +D+ G+        + L  L+  S   + + LVL A  
Sbjct: 211 ARGPDGLATLVPNMQQQFGVIFIDSPGLNPFSQDDMDYLRALI--SAVPMDAALVLNAGT 268

Query: 404 QRKVLQETIEHFRRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVA------YIANG 454
                 E  E F  +  S  + T+LD    LG  ++     +L         ++ANG
Sbjct: 269 DPMEAMEIAEAFAEVGASRILATRLDMARRLGGILAAAEAGSLAFGDVSINPHVANG 325



 Score = 38.5 bits (88), Expect = 4e-07
 Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%)

Query: 1  MKIKRFFAKDMKTALLQVKEELGVDAVIMSNKKVA--GGVEIVAAVDGD 47
          M++K + A  M  A+  ++ ELG DA+I+S ++ +   GV I AA++GD
Sbjct: 28 MRLKCYTADSMADAMAAIRAELGDDAIIVSTQRASDGNGVRITAALEGD 76