Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., signal recognition particle-docking protein FtsY (RefSeq) from Shewanella loihica PV-4

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 90/383 (23%), Positives = 166/383 (43%), Gaps = 39/383 (10%)

Query: 101 ANMLKQYSSADEQEHRAENEDSLSALLKRQSENRAPQRNQTQRSQSSSERQRPDSPLGKL 160
           A   +Q   ADEQ  R E E++  A  K + E  A ++ + QR   + E+ R +    +L
Sbjct: 173 AEQAEQQRLADEQA-RVEAENARLAAEKAEQERLAAEQAEQQRI--AEEQARVEEENARL 229

Query: 161 LQEDADARRKPRLDPTRYDRKVPEEPMVAVSELESMREEMTSIRRLLEHQVSGL--MWQE 218
             E A    +    P         EP    ++          ++R  E+  SG   +++ 
Sbjct: 230 AAEQAGQEEQVEQQP---------EPQQKPTKEGFFARLKRGLKRTSENIGSGFIGLFKG 280

Query: 219 VERREPLRAMLIKRLERMGVSLEMADQLACYIPEETPPP--KAWKALLGLVSDQ------ 270
            +  + L   L ++L    V +E   +L   + E+      K  +AL  L+ ++      
Sbjct: 281 KKIDDELFEELEEQLLIADVGVETTSRLIASLTEQASRKQLKDGEALYELMREEMQKTLE 340

Query: 271 ---IPVVKHDILKRGGVVALLGPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGA 327
              IP+V  +  +   V+ ++G  GVGKTTT+ KLA +   +    +V L   DT+R  A
Sbjct: 341 PVSIPLVPENS-EGPFVILMVGVNGVGKTTTIGKLAKQYQQQ--GKSVMLAAGDTFRAAA 397

Query: 328 HEQLSIYGRIMGCPVRV----AKDSNELADVIYQLRNRR--LILVDTAGMGQRDVRLSEQ 381
            EQL ++G+    PV      A  ++ L D +   R R+  +++ DTAG  Q    L ++
Sbjct: 398 VEQLQVWGQRNDIPVIAQHTGADSASVLFDALQAARARKIDILIADTAGRLQNKAHLMDE 457

Query: 382 LDTLM-----QESGETIHSYLVLPATAQRKVLQETIEHFRRIPLSGCIMTKLDECLSLGE 436
           L  ++     Q+        L L A+  +  + +       + ++G  M+KLD     G 
Sbjct: 458 LKKVVRVMKKQDESAPHEVMLTLDASTGQNAISQAQLFKEAVGVTGITMSKLDGTAKGGV 517

Query: 437 FVSVVVQNALPVAYIANGQRVPE 459
             ++  +  +P+ +I  G+++ +
Sbjct: 518 IFAIADKFGIPIRHIGVGEQIDD 540