Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., signal recognition particle-docking protein FtsY from Methanococcus maripaludis S2

 Score = 67.4 bits (163), Expect = 8e-16
 Identities = 81/345 (23%), Positives = 158/345 (45%), Gaps = 34/345 (9%)

Query: 128 KRQSENRAPQRNQTQRSQSSSERQRPDSPLGKLLQEDADARRK----PRLDPTRYDRKV- 182
           K   E+   +  +    ++ +  ++P+  L ++  E  + + K     +L  T+  +KV 
Sbjct: 27  KAVEESNLKETPEIIGEENKTNLKKPEKDLKEINTESFEKKEKIGFLDKLAVTKSIKKVL 86

Query: 183 PEEPMVAVSELESMREEMTSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLERMGVSLEM 242
            ++ ++   ++E + EEM     L E  V+   +  VE+       +I+ L+   V L++
Sbjct: 87  GKDVILTEDDIEDVLEEMEM--ELFEADVA---FDVVEK-------IIESLKNQLVGLKI 134

Query: 243 ADQLACYIPEETPPPKAWKALLGLVSDQIPVVKH--DILKRGGVVALL---GPTGVGKTT 297
           +   A   PEE       K++ G++S +   V +  D  K  G  A+L   G  G GKTT
Sbjct: 135 S---AKDDPEEITINALKKSIKGILSQEKIDVFNLIDEKKANGEPAVLLFVGINGTGKTT 191

Query: 298 TVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVRVAKDSNELADVIY- 356
           +++KLA    ++    +  +   DT+R GA EQL  +G+  G  V   +   + A VIY 
Sbjct: 192 SISKLAY--ILKEKGYSAVMAAGDTFRAGAIEQLEEHGKNTGIKVIKHQKGADSAAVIYD 249

Query: 357 -----QLRNRRLILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYLVLPATAQRKVLQET 411
                + +   ++L DTAG    ++ L +++  +++ +   +  + V  + A    + + 
Sbjct: 250 AISHAKAKGLNVVLADTAGRQTTNINLMDEIKKVVRVTKPDLIIF-VGDSLAGNDAISQA 308

Query: 412 IEHFRRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIANGQR 456
            E    I ++G I+TK D     G  +S+      P+ ++  GQR
Sbjct: 309 EEFNNTININGAILTKTDADAKGGAALSIAYSIGKPILFMGVGQR 353