Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., flagellar biosynthesis protein FlhF, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 54.7 bits (130), Expect = 5e-12
 Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 13/273 (4%)

Query: 194 ESMREEMTSIRR-LLEHQVSGLMWQEVERREPLRAMLIKRLERMGVSLEMADQLACYIPE 252
           ES   E + I+  LL     GL    +E+  P + + ++ LER GV   +   L   +  
Sbjct: 77  ESWHREWSCIKEHLLALMKPGL---RLEQLTPRQRLALEFLEREGVEDTVLMSLYRRLLT 133

Query: 253 ETPPPKAWKALLGLVSDQIPVVKHDILKRGGVVALLGPTGVGKTTTVAKLAARA-AMEYG 311
            +P     + L G+V  + P  +    +R  V A  GP G GKTTT+ ++A R    E  
Sbjct: 134 -SPGASVLEPLTGMVPVK-PWSREAWPQRVHVFA--GPFGSGKTTTLVRMALRGQGAESA 189

Query: 312 SDNVALVTTDTYRIGAHEQLSIYGRIMGCPVRVAKDSNELADVIYQLRNRRLILVDTAGM 371
              V +V  D  R      L  +  + G     A D   +   +    +R  + VD  G+
Sbjct: 190 GGRVQVVNADCERGNGRLLLRHWAELSGFGYAEAADDGAMRAALDCDADR--VFVDLPGL 247

Query: 372 GQRDVRLSEQLDTLMQESGETIHSYLVLPATAQRKVLQETIEHFRRIPLSGCIMTKLDEC 431
            + +  L+++L  L    G+ +  +LVLP     +   + +  +     +  + TKLDE 
Sbjct: 248 ARGET-LTQRLAHLGL-GGDDVAVHLVLPPHCGGQQTADFVNRYGAPGTASIVWTKLDEA 305

Query: 432 LSLGEFVSVVVQNALPVAYIANGQRVPEDIVIA 464
            + G  V+V   N LPV+ ++ G  +   +V A
Sbjct: 306 CTYGTLVNVAAANGLPVSALSFGPGLRGSLVSA 338



 Score = 30.8 bits (68), Expect = 8e-05
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 1  MKIKRFFAKDMKTALLQVKEELGVDAVIMSNK 32
          M++K +     +  L Q+K ELG DAVI+S +
Sbjct: 1  MQVKTYTGPSTQAVLAQIKSELGPDAVILSTR 32