Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., recognition particle-docking protein FtsY (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 70.5 bits (171), Expect = 8e-17
 Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 14/207 (6%)

Query: 268 SDQIPVVKHDILKRGGVVALLGPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGA 327
           SD +      I K+  V+ ++G  GVGKTTT+ KLA +   +    +V L   DT+R  A
Sbjct: 101 SDDVADFDVPIKKKPYVMMVVGVNGVGKTTTIGKLAYQ--FKKAGKSVYLGAADTFRAAA 158

Query: 328 HEQLSIYGRIMGCPVRVAKDSNELADVIYQ------LRNRRLILVDTAGMGQRDVRLSEQ 381
            EQL I+G  +G PV   K   + A V +         N  ++++DTAG     V L  +
Sbjct: 159 VEQLMIWGERVGVPVVKQKMGADPASVAFDTLSSAVANNADVVIIDTAGRLHNKVGLMNE 218

Query: 382 LDTLMQESGETIHS-----YLVLPATAQRKVLQETIEHFRRIPLSGCIMTKLDECLSLGE 436
           L  +     + + +      LVL  +  +   ++  +      ++   +TKLD     G 
Sbjct: 219 LTKIKNVMKKVVPNAPDEVLLVLDGSTGQNAFEQAKQFTLATEVTAMAITKLDGTAKGGV 278

Query: 437 FVSVVVQNALPVAYIANGQRVPEDIVI 463
            + +  Q  +PV YI  G+ + ED+ +
Sbjct: 279 VIGISDQFKIPVKYIGLGEGM-EDLQV 304