Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., signal recognition particle-docking protein FtsY (RefSeq) from Shewanella sp. ANA-3

 Score = 65.9 bits (159), Expect = 4e-15
 Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 13/187 (6%)

Query: 284 VVALLGPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVR 343
           V+ ++G  GVGKTTT+ KLA +   +     V L   DT+R  A EQL ++G+    PV 
Sbjct: 357 VILMVGVNGVGKTTTIGKLAKQYQRQ--GKTVMLAAGDTFRAAAVEQLQVWGQRNNIPVV 414

Query: 344 VAKDSNELADVIY------QLRNRRLILVDTAGMGQRDVRLSEQLDTLMQE----SGETI 393
                 + A V++      + R   +++ DTAG  Q    L E+L  +++       E  
Sbjct: 415 AQHTGADSASVLFDALQAAKARKIDILIADTAGRLQNKSHLMEELKKVVRVMKKLDPEAP 474

Query: 394 HS-YLVLPATAQRKVLQETIEHFRRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIA 452
           H   L L A+  +  + +       + ++G  ++KLD     G   ++  +  +P+ YI 
Sbjct: 475 HEVMLTLDASTGQNAISQAQLFQEAVGVTGMTISKLDGTAKGGVVFAIADKFKIPLRYIG 534

Query: 453 NGQRVPE 459
            G+++ +
Sbjct: 535 VGEQIDD 541