Pairwise Alignments
Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056
Subject, 458 a.a., flagellar biosynthesis regulator FlhF (RefSeq) from Shewanella sp. ANA-3
Score = 360 bits (924), Expect = e-104 Identities = 220/482 (45%), Positives = 302/482 (62%), Gaps = 41/482 (8%) Query: 1 MKIKRFFAKDMKTALLQVKEELGVDAVIMSNKKVAGGVEIVAAVDGDTAPAPAKRYNSQP 60 MKIKRFFAKDM+ AL QVK+ LG DAVIMSNKKV GG+EIVAAVD D A A Sbjct: 1 MKIKRFFAKDMRAALAQVKDTLGSDAVIMSNKKVNGGIEIVAAVDYDEPKAKA------- 53 Query: 61 RHGYNQVSPSVAPTKSRELADDRVSLQSSADSGRSMTQRFANMLKQYSSADEQEHRAENE 120 P+ APT +++DD VSL + A R LK + AD Sbjct: 54 --------PATAPT-FMDVSDDLVSLGAKAPI------RAETKLKPSAPAD--------- 89 Query: 121 DSLSALLKRQSENRAPQRNQTQRSQSSSERQRPDSPLGKLLQEDADARRKPRLDPTRYDR 180 SL ALL++Q R Q + + + P G LQ A + + R +D+ Sbjct: 90 -SLQALLEKQQS-----RLNQQLTHQQQDAELPAWAQG--LQAPAVPKAERRDMGQTFDK 141 Query: 181 KVPEEPMVAVSELESMREEMTSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLERMGVSL 240 K P+ +++E+MR+E+ S+R LL HQVS LM + +R +P+ AML +L S Sbjct: 142 K-PQVSQKQNADIEAMRDELASLRNLLTHQVSALMTEHKKRIDPVGAMLESKLLEAEFSP 200 Query: 241 EMADQLACYIPEETPPPKAWKALLGLVSDQIPVVKHDILKRGGVVALLGPTGVGKTTTVA 300 +A++LA + + P + +AL +++ + DI+K+GGVVAL+GPTGVGKTT++A Sbjct: 201 AVANKLAA-LSQHYTPAELVRALPQSLANMLDNQGDDIVKQGGVVALVGPTGVGKTTSLA 259 Query: 301 KLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVRVAKDSNELADVIYQLRN 360 KLAAR A +G+D VAL+TTD YRIGA+EQL+ YG+IMGCPV+ A D EL ++YQ RN Sbjct: 260 KLAARFAAHHGADQVALITTDHYRIGAYEQLATYGKIMGCPVKQAHDLAELEQILYQFRN 319 Query: 361 RRLILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYLVLPATAQRKVLQETIEHFRRIPL 420 R+L+L+DTAGMGQRD+RL +QLD L S I SYLVL AT QR+VLQ+ + HF+RIPL Sbjct: 320 RKLVLIDTAGMGQRDMRLYQQLDNLTANSRIPIRSYLVLSATGQRRVLQDAVNHFKRIPL 379 Query: 421 SGCIMTKLDECLSLGEFVSVVVQNALPVAYIANGQRVPEDIVIAQPKYMVAKANELLEKS 480 SG ++TKLDE +SL +SV++Q+ LP++Y+ +GQRVPED+ +A + +A LE + Sbjct: 380 SGVVLTKLDESVSLAGALSVLIQSGLPLSYVTDGQRVPEDMKVADTLLLAEQALAALENT 439 Query: 481 TE 482 + Sbjct: 440 EQ 441