Pairwise Alignments

Query, 122 a.a., chemotaxis protein CheY from Vibrio cholerae E7946 ATCC 55056

Subject, 1353 a.a., two-component system sensor histidine kinase/response (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 81.6 bits (200), Expect = 3e-20
 Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 2/116 (1%)

Query: 3    ILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGDFDFVVTDWNMPGMQGID 62
            ILIV+D + +RR + N L DL   NT EA +G  AL  LK  + D +VTD  MP M GI 
Sbjct: 1105 ILIVEDNNEIRRYLSNGLADLF--NTLEAGNGEEALEKLKDNEVDVIVTDVMMPVMDGIK 1162

Query: 63   LLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKI 118
            L KN++ +    H+PV++++A+   +  +E  Q G + YI KPF+ A L  K+  +
Sbjct: 1163 LCKNVKQNIRTCHIPVIILSAKTDIKDQMEGLQMGADDYIPKPFSLAILTTKIQNM 1218