Pairwise Alignments
Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056
Subject, 1977 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2
Score = 227 bits (579), Expect = 4e-63
Identities = 214/826 (25%), Positives = 354/826 (42%), Gaps = 124/826 (15%)
Query: 5 LDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELV 64
+++D++ FL EA +ILE ++ L +P++ L+++ R HT+KGGA + +
Sbjct: 1069 MEDDLVAIFLEEAQDILESAAQALQRWLADPDNGAPLSSLQRDLHTLKGGARMADIRPVS 1128
Query: 65 ETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADP-ELLDEL 123
+ EN+++ L + + S L + + + ++ +Q+ +PL DP L+D +
Sbjct: 1129 DLAQELENLYEGLVDRRYSYSEELAQLLASSHERLDLLLGQLQQGQPL--GDPVALIDAI 1186
Query: 124 HRLSKPASEDEDEAAEAHFDEPEEELVEEIIEEVVEDVVEEAVPNVETEVTASASSGVID 183
RL + D+P +ET A A D
Sbjct: 1187 RRLRQ--------------DKPNA---------------------IETSAAAQADGAGHD 1211
Query: 184 KGSIDDINEDEFEKLLDELHGKGKAPGAQSPQAPASAPAKAASVTNSDLNGDITDDEFEK 243
++ E+ F D L G A + + P++ A E
Sbjct: 1212 PELLEIFLEEGF----DILDSSGAAL-LRWQEEPSNRQA------------------VET 1248
Query: 244 LLDQLHGKGKGPSIETAAPAAPVTPSTPKATETPKPAAAKSAPGGDDLM--TDEEFEKLL 301
LL LH G + P + E + P L+ + + ++L
Sbjct: 1249 LLRDLHTLKGGARMVEIVPIGDLAHELENLYEGLSAGLLQPTPALFTLLQSSHDRLAQML 1308
Query: 302 DELHGSGKGPSVEELEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAKPAAAKPAVA 361
D + P + L + V S ++ A + A P P P A PA P A
Sbjct: 1309 DAVRAGHPCPLADRLIAQIQAVNHSQENA-APQAVSAPEPVPTPIVSPPAAPARPDPGAA 1367
Query: 362 KEEPAKAPAPAAVKDS--DESREVAAAGGAKKAQT----------ESTV--------RVD 401
+ A + D + + E + G + Q E+T+ R+D
Sbjct: 1368 GDGADMVKVSAELLDDLVNLAGETSIFRGRIEQQVNDARVALGEMETTIERMRDQLRRLD 1427
Query: 402 TSTLDTIMNM----VGELVLVRNRLLSLGLNSNDEEMSKAV----------------ANL 441
T T I++ L L + +S +++S+A+ +N
Sbjct: 1428 TETQGRILSRQQVEAERLGYEEFDPLEMDRHSQLQQLSRALFESASDLLELKETLDRSNH 1487
Query: 442 DV---------VTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETD 492
D + +LQ +M+TRM P +++ R R+VR +A+ L K+++ + + +
Sbjct: 1488 DAEVLLQQQGRINTELQEGLMRTRMVPFERMLPRLKRIVRQVAQELGKDVEFLVGNADGE 1547
Query: 493 LDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDD 552
+D+N++E +A PL H++RN+VDHG+E D R GK G++ L S+EG I I DD
Sbjct: 1548 MDRNVLERMAAPLEHMLRNAVDHGLEPADVRIAAGKPARGRISLDLSREGGDIIFDIRDD 1607
Query: 553 GAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVV 612
GAG+ + +R A+KRG++ D + +++++ I PGFS+ EKIT ISGRGVGMDVV
Sbjct: 1608 GAGVPLEAVRSKAIKRGLLAPD--SDISDRDVLQFILQPGFSTAEKITQISGRGVGMDVV 1665
Query: 613 KTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIFHLD 672
+ L GS+ IDST G+G I++P T+A+ LMV +A+PL ++ I +
Sbjct: 1666 HEEVRQLGGSMVIDSTPGQGVHFRIRLPFTVAVNRALMVHCHEDQYAIPLNTIESIVRV- 1724
Query: 673 LRRTNVVDGQL-----TIIVREKSIPLFYLQNWLAPKKGKVQLRQGHG-HVVIVQIGSQR 726
+DG T + L YL L L Q V++VQ +
Sbjct: 1725 --LPAELDGHYQLDPPTYTYAGQRYELCYLGELLKTGARPKLLGQSQPLPVLLVQCNERH 1782
Query: 727 VGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDV 772
V + VD G E+V+K L G+SGATI DG + LILD+
Sbjct: 1783 VAVQVDATAGTREIVVKSLGPQFSAVQGLSGATILGDGRVVLILDL 1828
Score = 55.5 bits (132), Expect = 3e-11
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Query: 5 LDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELV 64
+D+++ + FL E GE+L++L E L +P+D L+ + R FHT+KG + L
Sbjct: 626 VDDELREVFLEETGEVLDVLREYLPRWSAHPDDHGALSELRRAFHTLKGSGRMVRALVLG 685
Query: 65 ETCHGAENVFDILRNGQRHVSP-----SLMDTMLKALDTVNEQFRAVQEREPLQPADPEL 119
E EN+ + R +R V P L++ ++ L + +F A +R+ + L
Sbjct: 686 ELAWAVENLLN--RVLERSVEPQASVRQLVEDTVQLLPALVAEFAANHQRQ--RDDVDRL 741
Query: 120 LDELHRLSKPA-SEDEDEAAEAHFD 143
H L+K EDEDE A D
Sbjct: 742 AARAHVLAKGGDEEDEDEQDVAALD 766