Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  855 bits (2208), Expect = 0.0
 Identities = 485/794 (61%), Positives = 571/794 (71%), Gaps = 58/794 (7%)

Query: 1   MSYELDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLAL 60
           MS+  DE+ILQDFLVEAGEILE LSEQLVELE+ P+D DLLNAIFRGFHTVKGGAGFL L
Sbjct: 1   MSFGADEEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQL 60

Query: 61  SELVETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELL 120
           +ELVE CH AENVFDILR G+R V   LMD +L+ALD VN  F  V+ER P+  A PELL
Sbjct: 61  NELVECCHIAENVFDILRKGERRVDSELMDVVLEALDAVNSMFSEVRERSPITAATPELL 120

Query: 121 DELHRLSKPASEDEDE-AAEAHFDEPEEELVEEIIEEVVEDVVEE---AVPNVETEVTAS 176
             L RL++P S DE    AE   +EP  E   +I +   E +++         E  V  +
Sbjct: 121 AALARLAEPQSADEAAPVAEPAVEEPVAEASGDITDNEFEQLLDSLNTVKAQAEAPVAPA 180

Query: 177 ASSGVIDKG-SIDDINEDEFEKLLDELHGKGK-APGAQSPQAPASAPAKAASVTNSDLNG 234
           A +  +  G + D+I + EFE LLD+LHGKG+ AP A  P    +AP  A        + 
Sbjct: 181 APAAPVADGVASDEITDAEFESLLDQLHGKGQFAPDAVVPPTAPAAPKAAGD------SS 234

Query: 235 DITDDEFEKLLDQLHGKGKGP--SIETAAPAAPVTPSTPKATETPKPAAAKSAPGGDDLM 292
           DITDDEFE LLDQLHGKG     ++++A  + P TP+        KPAAA +   G DL+
Sbjct: 235 DITDDEFEALLDQLHGKGTFAVDALDSAIASVP-TPA--------KPAAATA---GSDLI 282

Query: 293 TDEEFEKLLDELHGSGKGPSVEELEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAK 352
           +D EFE LLDELHG GK   V                  A A+  A+A +  PAAK   K
Sbjct: 283 SDHEFESLLDELHGKGKFSEV----------------GTASAAPAAAAAAAAPAAKAAPK 326

Query: 353 PAAAKPAVAKEEPAK----APAPAAVKDSDESREVAAAGGAKKA-QTESTVRVDTSTLDT 407
           PAA  P   K EPAK    APAPA        R  AAA   K A + E+TVRVDT+ LD 
Sbjct: 327 PAAKAPE-PKAEPAKPAAAAPAPA--------RAAAAAPAEKPASEAETTVRVDTARLDE 377

Query: 408 IMNMVGELVLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRF 467
           IMNMVGELVLVRNRL+ LGLNS DE MSKAV+NLDVVTADLQ AVMKTRMQPIKKVFGRF
Sbjct: 378 IMNMVGELVLVRNRLVRLGLNSQDEAMSKAVSNLDVVTADLQTAVMKTRMQPIKKVFGRF 437

Query: 468 PRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNG 527
           PR+VRDLAR L KEI+LEL GEETDLDKNLVEALADPL+HLVRN+VDHGIE P+ER  +G
Sbjct: 438 PRLVRDLARQLKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIESPEEREASG 497

Query: 528 KSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNL 587
           K R+GKVIL+A QEGDHI L+I DDG GMDP+ LR IAVKRG+MD+DAA+RL++ EC+NL
Sbjct: 498 KVRSGKVILAAEQEGDHILLSISDDGKGMDPNVLRSIAVKRGVMDKDAADRLSDTECYNL 557

Query: 588 IFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILP 647
           IF PGFS+K +I+D+SGRGVGMDVVKT I+ LNGSI+I ST G+G+KI IKVPLTLAI+P
Sbjct: 558 IFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIYSTKGQGSKIVIKVPLTLAIMP 617

Query: 648 TLMVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPKKGK 707
           TLMV +    FA PL +VNEIFHLDL RTNVVDGQ  +IVR+K++PLFYL+ WL      
Sbjct: 618 TLMVMLGNQAFAFPLVNVNEIFHLDLSRTNVVDGQEVVIVRDKALPLFYLKRWLVSSAAH 677

Query: 708 VQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIA 767
           V+  QG GHVVI+ +G+QR+G VVD L+GQEEVVIKPL K+LQGTPGMSGATIT DG IA
Sbjct: 678 VE--QGEGHVVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIA 735

Query: 768 LILDVPDLLKQYAA 781
           LILDVP +LK+YAA
Sbjct: 736 LILDVPSMLKRYAA 749